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Updated: Jul 24, 2025

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In Vitro and In Vivo Approaches to Determine Intestinal Epithelial Cell Permeability
Published on: October 19, 2018
25.6K
Ex vivo intestinal permeability assay (X-IPA) for tracking barrier function dynamics.
Hadar Bootz-Maoz1,2, Ariel Simon1,2, Sara Del Mare-Roumani1,2
1The Goodman Faculty of Life Sciences, Bar-Ilan University, Ramat-Gan, 5290002, Israel.
NPJ Biofilms and Microbiomes
|July 3, 2023
Summary
We developed an ex vivo intestinal permeability assay (X-IPA) to study gut barrier dynamics. This method reveals how microbes and metabolites rapidly alter gut permeability, aiding barrier function research.
Area of Science:
- Gastroenterology and immunology
- Microbiome research
- Epithelial biology
Background:
- The intestinal epithelial barrier is crucial for maintaining host-microbiota homeostasis and immune tolerance.
- Understanding dynamic changes in barrier function upon luminal stimulation is challenging.
- Existing methods lack the resolution for whole-tissue dynamic analysis.
Purpose of the Study:
- To introduce a novel ex vivo intestinal permeability assay (X-IPA) for quantitative analysis of gut barrier dynamics.
- To investigate the impact of luminal stimuli, including microbes and metabolites, on intestinal permeability.
- To provide a tool for precise investigation of intestinal barrier functions.
Main Methods:
- Development of an ex vivo intestinal permeability assay (X-IPA).
- Quantitative analysis of whole-tissue gut permeability.
- Exposure of intestinal tissue to specific gut microbes and metabolites.
Main Results:
- The X-IPA assay allows for quantitative analysis of gut permeability at the whole-tissue level.
- Specific gut microbes and metabolites were shown to induce rapid, dose-dependent increases in gut permeability.
- The assay provides a powerful approach for investigating barrier dynamics.
Conclusions:
- The X-IPA assay is a valuable tool for studying the dynamic regulation of intestinal barrier function.
- Luminal factors like microbes and metabolites significantly influence gut permeability.
- This assay facilitates a more precise understanding of host-microbiota interactions and barrier integrity.

