Adapting modeling and simulation credibility standards to computational systems biology.
Lillian T Tatka1, Lucian P Smith2, Joseph L Hellerstein3
1Department of Bioengineering, University of Washington, Seattle, WA, USA. ltatka@uw.edu.
Journal of Translational Medicine
|July 26, 2023
Summary
Computational models are vital for decision-making across science and medicine. This study reviews credibility standards for systems biology models and proposes a new, crucial assessment system.
Area of Science:
- Computational modeling and simulation across science, engineering, and medicine.
- Application of computational models in high-stakes decision-making processes.
- Development of credibility standards for scientific models.
Background:
- Computational models are increasingly utilized by organizations like NASA, FDA, and EMA for complex experiments and regulatory approvals.
- Existing credibility standards for computational models are often qualitative due to the broad scope of assessment.
- Systems biology modeling is a specialized domain with existing standards, facing growing complexity and influence.
Purpose of the Study:
- To review existing credibility standards within systems biology.
- To examine credibility standards employed in other scientific, engineering, and medical fields.
- To propose the development of a specific credibility assessment system for systems biology models.
Main Methods:
- Literature review of current systems biology modeling standards.
- Analysis of credibility assessment frameworks used by NASA, FDA, and EMA.
- Comparative study of qualitative and quantitative approaches to model credibility.
Main Results:
- Identification of existing, albeit qualitative, credibility standards in systems biology.
- Recognition of diverse, often qualitative, credibility standards in broader scientific and regulatory fields.
- Highlighting the need for a more defined credibility assessment system tailored to systems biology.
Conclusions:
- Credibility assessment is crucial for the reliable use of computational models in high-stakes decision-making.
- Existing qualitative standards necessitate the development of a more specific and robust system for systems biology.
- A dedicated credibility standard for systems biology models is proposed to enhance their trustworthiness and impact.
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