Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Experiment Videos

Providing open imaging data at scale: An EMBL-EBI perspective.

Matthew Hartley1, Andrii Iudin2, Ardan Padwardhan2

  • 1European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Hinxton, UK. matthewh@ebi.ac.uk.

Histochemistry and Cell Biology
|August 3, 2023
PubMed
Summary
This summary is machine-generated.

Related Concept Videos

Imaging Biological Samples with Optical Microscopy01:18

Imaging Biological Samples with Optical Microscopy

4.8K
Optical microscopy uses optic principles to provide detailed images of samples. Antonie van Leeuwenhoek designed the first compound optical microscope in the 17th century to visualize blood cells, bacteria, and yeast cells. In 1830, Joseph Jackson Lister created an essentially modern light microscope. The 20th century saw the development of microscopes with enhanced magnification and resolution.
In optical microscopy, the specimen to be viewed is placed on a glass slide and clipped on the stage...
4.8K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

BioStudies Database: A Platform for Life Sciences Study Data Dissemination.

Journal of molecular biology·2026
Same author

Building capacity in imaging data management.

Journal of microscopy·2026
Same author

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Frontiers in bioinformatics·2026
Same author

An extremely lucky 9-year-old.

Eye (London, England)·2025
Same author

EMBL's European Bioinformatics Institute (EMBL-EBI) in 2025.

Nucleic acids research·2025
Same author

BioSamples database: the global hub for sample metadata and multi-omics integration.

Nucleic acids research·2025

Biological imaging generates vast data, necessitating open repositories for reproducibility and discovery. This perspective outlines strategies for global interoperability in sharing biological imaging data.

Area of Science:

  • Biological imaging
  • Bioinformatics
  • Data science

Background:

  • Biological imaging is crucial for understanding living systems across scales.
  • Advances in imaging technology enhance resolution and data volume.
  • Increasing data requires robust storage and analysis solutions.

Purpose of the Study:

  • To address the challenges and opportunities in sharing biological imaging data.
  • To propose a path towards global interoperability for biological image data.
  • To leverage decades of experience in providing open biological data resources.

Main Methods:

  • Perspective-based analysis of open data provision in biological imaging.
  • Review of challenges and opportunities in large-scale biological imaging data sharing.
Keywords:
BioimagingData integrationData managementMetadata

Related Experiment Videos

  • Formulation of strategies for global data interoperability.

    • Main Results:

    • Public image repositories are vital for scientific reproducibility and data reuse.
    • The increasing scale of imaging data presents both challenges and opportunities.
    • A focus on specific areas is needed to achieve global interoperability.

    Conclusions:

    • Open data sharing in biological imaging is essential for scientific advancement.
    • Global interoperability of biological image data is achievable through focused strategies.
    • Continued development of open data resources will accelerate biological discovery.