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Multidrug-Resistant and Extensively Drug-Resistant Acinetobacter baumannii Causing Nosocomial Meningitis in the
Nadezhda K Fursova1, Mikhail V Fursov2, Evgeny I Astashkin1
1Department of Molecular Microbiology, State Research Center for Applied Microbiology and Biotechnology, Territory "Kvartal A", 142279 Obolensk, Russia.
Abstract:
Acinetobacter baumannii is one of the significant healthcare-associated meningitis agents characterized by multidrug resistance and a high mortality risk. Thirty-seven A. baumannii strains were isolated from thirty-seven patients of Moscow neuro-ICU with meningitis in 2013-2020. The death rate was 37.8%. Strain susceptibility to antimicrobials was determined on the Vitek-2 instrument. Whole-genome sequencing was conducted using Illumina technology; the sequence types (ST), capsular types (KL), lipooligosaccharide outer core locus (OCL), antimicrobial resistance genes, and virulence genes were identified. The prevalent ST was ST2, belonging to the international clone IC2, and rarer, ST1, ST19, ST45, ST78, ST106, and ST400, with prevalence of KL9 and OCL1. Twenty-nine strains belonged to multidrug-resistant (MDR) and eight extensively drug-resistant (XDR) categories. Genes conferring resistance to beta-lactams (blaPER, blaGES, blaADC, blaCARB, blaCTX-M, blaTEM, and blaOXA-types), aminoglycosides (aac, aad, ant, aph, and arm), tetracyclines (tet), macrolides (msr and mph), phenicols (cml, cat, and flo), sulfonamides (dfr and sul), rifampin (arr), and antiseptics (qac) were identified. Virulence genes of nine groups (Adherence, Biofilm formation, Enzymes, Immune evasion, Iron uptake, Regulation, Serum resistance, Stress adaptation, and Antiphagocytosis) were detected. The study highlights the heterogeneity in genetic clones, antimicrobial resistance, and virulence genes variability among the agents of A. baumannii meningitis, with the prevalence of the dominant international clone IC2.
Insights
Acinetobacter baumannii meningitis is a serious threat, with multidrug-resistant strains causing high mortality. This study identified prevalent genetic clones and diverse antimicrobial resistance and virulence genes in Moscow neuro-ICU patients.
Area of Science:
- Medical Microbiology
- Infectious Diseases
- Genomics
Background:
- Acinetobacter baumannii is a significant cause of healthcare-associated meningitis.
- This pathogen is associated with multidrug resistance and high mortality rates.
- Understanding its genetic diversity and resistance mechanisms is crucial for effective treatment.
Purpose of the Study:
- To characterize the genetic makeup, antimicrobial resistance, and virulence factors of Acinetobacter baumannii strains causing meningitis.
- To identify prevalent sequence types (ST) and international clones.
- To investigate the diversity of antimicrobial resistance and virulence genes.
Main Methods:
- Isolation and identification of Acinetobacter baumannii strains from meningitis patients.
- Antimicrobial susceptibility testing using the Vitek-2 instrument.
- Whole-genome sequencing (Illumina) to determine sequence types (ST), capsular types (KL), and lipooligosaccharide outer core locus (OCL).
- Identification of antimicrobial resistance and virulence genes.
Main Results:
- Thirty-seven Acinetobacter baumannii strains were analyzed from Moscow neuro-ICU patients (2013-2020), with a 37.8% mortality rate.
- The prevalent sequence type was ST2, belonging to the international clone IC2.
- Twenty-nine strains were multidrug-resistant (MDR) and eight were extensively drug-resistant (XDR), with various resistance genes identified.
- Multiple virulence genes across nine functional groups were detected, indicating significant pathogenic potential.
Conclusions:
- Acinetobacter baumannii meningitis exhibits heterogeneity in genetic clones, antimicrobial resistance, and virulence gene profiles.
- The international clone IC2, particularly ST2, is dominant among these meningitis-causing strains.
- The findings underscore the need for continued surveillance and tailored therapeutic strategies against Acinetobacter baumannii meningitis.
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