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Updated: Jul 12, 2025

Author Spotlight: Characterizing DNA Replication of Pathogenic Repeats to Uncover Mechanisms of Replication Fork Stalling and Expansion
Published on: September 13, 2024
Advances in the discovery and analyses of human tandem repeats
Mark J P Chaisson1,2, Arvis Sulovari3, Paul N Valdmanis4,5,6
1Department of Quantitative and Computational Biology, University of Southern California, Los Angeles, CA 90089, U.S.A.
Abstract:
Long-read sequencing platforms provide unparalleled access to the structure and composition of all classes of tandemly repeated DNA from STRs to satellite arrays. This review summarizes our current understanding of their organization within the human genome, their importance with respect to disease, as well as the advances and challenges in understanding their genetic diversity and functional effects. Novel computational methods are being developed to visualize and associate these complex patterns of human variation with disease, expression, and epigenetic differences. We predict accurate characterization of this repeat-rich form of human variation will become increasingly relevant to both basic and clinical human genetics.
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