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Updated: Jul 11, 2025

Synthesis of Information-bearing Peptoids and their Sequence-directed Dynamic Covalent Self-assembly
Published on: February 6, 2020
Pathway selection in the self-assembly of Rh4L4 coordination squares under kinetic control
Atsushi Okazawa1, Naoki Sanada2, Satoshi Takahashi2
1Department of Electrical Engineering and Bioscience, Waseda University, Tokyo, 169-8555, Japan.
Scientists achieved kinetic control in molecular self-assembly, forming squares instead of triangles. This was done by using a specific ligand to block the pathway to triangular structures in reversible reaction networks.
Area of Science:
- Supramolecular Chemistry
- Chemical Self-Assembly
- Coordination Chemistry
Background:
- Establishing pathway selection principles in reversible reaction networks, like molecular self-assembly, remains challenging.
- Kinetic control in reversible systems is more complex than in irreversible ones.
- Understanding self-assembly pathways is crucial for designing complex molecular architectures.
Purpose of the Study:
- To investigate kinetic control in the self-assembly of coordination squares and triangles.
- To elucidate the role of a leaving ligand in directing self-assembly pathways.
- To explore the formation of higher-order structures from self-assembled components.
Main Methods:
- Utilized cis-protected dinuclear rhodium(II) corner complexes and linear ditopic ligands for self-assembly.
- Employed a weak monotopic carboxylate ligand (2,6-dichlorobenzoate, dcb-) as a leaving ligand.
- Combined experimental techniques with numerical approaches to analyze the self-assembly pathway.
- Characterized the resulting structures using nuclear magnetic resonance (NMR) spectroscopy and single-crystal X-ray analysis.
Main Results:
- Achieved kinetic control, selectively forming coordination squares and preventing triangle formation.
- Identified that the dcb- ligand blocks the cyclization step leading to triangular complexes.
- Observed the formation of a dimeric structure from one of the molecular squares due to solvophobic effects.
Conclusions:
- Demonstrated a method for achieving kinetic control in reversible self-assembly systems.
- Showcased the ability to selectively form molecular squares by modulating energy landscapes with a leaving ligand.
- Highlighted the influence of solvophobic effects on the assembly of supramolecular structures.
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