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A Nonsequencing Approach for the Rapid Detection of RNA Editing
Published on: April 21, 2022
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Cut-insert-stitch editing reaction (CIStER) sequence for surgical chemical glycan editing
Sumit Sen1, Suman Kundu1, Sandip Pasari1
1Department of Chemistry, Indian Institute of Science Education and Research Pune, Pune, 411 008, India.
Communications Chemistry
|April 2, 2024
Summary
This study introduces a novel one-pot chemical method to edit glycoconjugates by cutting and stitching specific bonds. This technique allows for the synthesis of diverse carbohydrate structures, including those found in bacterial cell walls.
Area of Science:
- Carbohydrate Chemistry
- Synthetic Organic Chemistry
- Glycobiology
Background:
- Post-synthetic modification allows for the creation of diverse molecules from a single precursor.
- Synthetically inserting foreign glycans into existing carbohydrate structures remains a significant challenge in chemistry.
Purpose of the Study:
- To develop a novel, efficient chemical strategy for editing glycoconjugates.
- To demonstrate the versatility of the new method in synthesizing complex carbohydrate structures and glycohybrids.
Main Methods:
- A one-pot, three-step chemical approach termed 'cut-insert stitch-editing' (CIStER) was developed.
- The method involves cleaving an interglycosidic bond, intercepting the intermediate, activating a donor, and stitching to form new linkages.
- The reaction was validated by inserting arabinans and synthesizing glycohybrids with hydroxyacids.
Main Results:
- The CIStER reaction successfully inserted branched and linear arabinans, mimicking the Mycobacterium tuberculosis cell wall.
- The approach was extended to create glycohybrids by glycosylating serinyl, steroidal, and lipid hydroxyacids.
Conclusions:
- The developed CIStER reaction provides a powerful tool for the post-synthetic editing of glycoconjugates.
- This method enables the synthesis of complex oligosaccharides and glycohybrids with potential applications in various fields.
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