Unveiling esophageal cancer treatment mechanisms: network pharmacology and molecular docking of Physcion
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Published on: March 3, 2023
Guangbing Hu1, Haiyang Guo1, Liuyi Lu2
1Department of Gastroenterology, Affiliated Hospital of North Sichuan Medical College, Nanchong, 637000, Sichuan, China.
Abstract:
This study investigates the effects of Physcion on esophageal cancer and its possible mechanisms of action. Potential Physcion targets were identified using databases. Transcriptomic data from 17 esophageal cancer and adjacent tissues were analyzed to find differentially expressed genes, intersecting with potential targets to select 16 key genes. Their expression and distribution were evaluated in patient sequencing data. Diagnostic potential was assessed through differential gene expression and ROC curves. Pathway enrichment analysis was performed using KEGG, and molecular docking simulations were conducted to assess Physcion's binding affinity to key genes. In vitro assays complemented these findings. A total of 161 drug targets were identified, narrowing down to 16 pivotal genes. Expression patterns were examined across cell populations, and enrichment analysis showed significant PI3K/AKT pathway involvement. Molecular docking indicated strong binding of Physcion to HSP90AA1 and MMP2. In vitro assays confirmed Physcion's dose- and time-dependent impact on esophageal cancer cells, with significant DAPI staining effects. Physcion shows promise as a therapeutic agent for esophageal cancer. The study supports its potential for clinical development and future research in esophageal cancer treatment.
Insights
Physcion demonstrates therapeutic potential for esophageal cancer by impacting key genes and pathways. Further research supports its clinical development for treating this disease.
Area of Science:
- Oncology
- Pharmacology
- Molecular Biology
Background:
- Esophageal cancer remains a significant health challenge with limited effective treatments.
- Identifying novel therapeutic agents and understanding their mechanisms of action are crucial for improving patient outcomes.
Purpose of the Study:
- To investigate the therapeutic effects of Physcion on esophageal cancer.
- To elucidate the underlying molecular mechanisms and identify potential drug targets.
- To assess the diagnostic potential of key genes and Physcion's binding affinity to them.
Main Methods:
- Bioinformatic analysis of transcriptomic data from esophageal cancer tissues.
- Identification and validation of key differentially expressed genes.
- Pathway enrichment analysis (KEGG) and molecular docking simulations.
- In vitro assays to evaluate Physcion's effects on esophageal cancer cells.
Main Results:
- 16 pivotal genes were identified, with significant involvement in the PI3K/AKT pathway.
- Physcion exhibited strong binding affinity to Heat Shock Protein 90 Alpha Class A Member 1 (HSP90AA1) and Matrix Metallopeptidase 2 (MMP2).
- In vitro studies confirmed Physcion's dose- and time-dependent inhibitory effects on esophageal cancer cells.
Conclusions:
- Physcion shows significant promise as a therapeutic agent for esophageal cancer.
- The study provides a foundation for the clinical development of Physcion.
- Further research into Physcion's mechanisms and clinical efficacy is warranted.
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