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Related Concept Videos

¹³C NMR: ¹H–¹³C Decoupling01:04

¹³C NMR: ¹H–¹³C Decoupling

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The probability of having two carbon-13 atoms next to each other is negligible because of the low natural abundance of carbon-13. Consequently, peak splitting due to carbon-carbon spin-spin coupling is not observed in spectra. However, protons up to three sigma bonds away split the carbon signal according to the n+1 rule, resulting in complicated spectra.
A broadband decoupling technique is used to simplify these complex, sometimes overlapping, signals. Broadband decoupling relies on a...
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¹³C NMR: Distortionless Enhancement by Polarization Transfer (DEPT)01:20

¹³C NMR: Distortionless Enhancement by Polarization Transfer (DEPT)

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When proton-coupled carbon-13 spectra are simplified by a broadband proton decoupling technique, structural information about the coupled protons is lost. Distortionless enhancement by polarization transfer (DEPT) is a technique that provides information on the number of hydrogens attached to each carbon in a molecule. While the DEPT experiment utilizes complex pulse sequences, the pulse delay and flip angle are specifically manipulated. The resulting signals have different phases depending on...
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2D NMR: Overview of Homonuclear Correlation Techniques01:16

2D NMR: Overview of Homonuclear Correlation Techniques

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Homonuclear correlation spectroscopy (COSY) is a powerful technique used in Nuclear Magnetic Resonance (NMR) spectroscopy to study the correlations between nuclei of the same type within a molecule. It provides information about scalar couplings between adjacent nuclei, which helps determine connectivity and structural information. There are several COSY variants, each with its unique strengths and experimental parameters.
COSY90 is the standard two-dimensional (2D) COSY experiment that...
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¹H NMR: Interpreting Distorted and Overlapping Signals01:02

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Spin systems where the difference in chemical shifts of the coupled nuclei is greater than ten times J are called first-order spin systems. These nuclei are weakly coupled, and their chemical shifts and coupling constant can generally be estimated from the well-separated signals in the spectrum.
As Δν decreases and the signals move closer, the doublets appear increasingly distorted. The intensities of the inner lines increase at the cost of those of the outer lines as the signals are...
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Two-Dimensional (2D) NMR: Overview01:12

Two-Dimensional (2D) NMR: Overview

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The 1D NMR spectrum of large and complex molecules like natural products has complicated splitting patterns and overlapping signals, which can be easily interpreted using 2-dimensional (2D) NMR. Unlike 1D NMR, 2D NMR has two frequency axes that provide the coupling information between the nucleus A and nucleus B in a molecule. The process from which 2D spectra are obtained has four steps.
The first step is the preparation period, during which nucleus A is excited with a radiofrequency pulse....
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2D NMR: Overview of Heteronuclear Correlation Techniques01:18

2D NMR: Overview of Heteronuclear Correlation Techniques

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Heteronuclear correlation spectroscopy is an analytical technique that investigates the coupling between different types of nuclei, often a proton and an X-nucleus, such as carbon-13 or nitrogen-15. This method is commonly used in nuclear magnetic resonance (NMR) spectroscopy to gain insights into complex chemical compounds' structural and compositional aspects. A typical heteronuclear correlation spectrum displays X-nucleus chemical shifts on one axis and a proton spectrum on the other...
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Updated: Jun 12, 2025

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NMR-Onion - a transparent multi-model based 1D NMR deconvolution algorithm.

Mathies Brinks Sørensen1, Michael Riis Andersen2, Mette-Maya Siewertsen1

  • 1Department of Chemistry, Technical University of Denmark, Kgs Lyngby, DK-2800, Denmark.

Heliyon
|September 19, 2024
PubMed
Summary
This summary is machine-generated.

NMR-Onion is a new open-source algorithm for automatic deconvolution of 1D Nuclear Magnetic Resonance (NMR) spectra. It efficiently handles complex line shapes and minimizes excessive peak detection for precise analysis.

Keywords:
Computationally efficiencyDeconvolutionExtensive overlapsHigh sensitivityOpen sourceStatistical evidenceTime domain models

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Area of Science:

  • Analytical Chemistry
  • Spectroscopy
  • Computational Chemistry

Background:

  • Nuclear Magnetic Resonance (NMR) spectroscopy is crucial for molecular structure elucidation.
  • Automatic deconvolution of 1D NMR spectra is challenging due to complex line shapes and overlapping signals.
  • Existing methods may struggle with asymmetric non-Lorentzian line shapes and can lead to excessive peak detection.

Purpose of the Study:

  • To introduce NMR-Onion, an open-source, computationally efficient algorithm for automated 1D NMR spectral deconvolution.
  • To develop a tool capable of handling asymmetric non-Lorentzian line shapes.
  • To improve the precision and efficiency of NMR spectral analysis.

Main Methods:

  • Development of an algorithm using Python and PyTorch.
  • Implementation of two innovative time-domain models for spectral deconvolution.
  • Inclusion of resolution-enhanced peak detection and digital filtering capabilities.
  • Integration of three built-in statistical models with automatic selection via the Bayesian Information Criterion (BIC).
  • Assessment of result repeatability through post-modeling uncertainty evaluation.

Main Results:

  • NMR-Onion provides computationally efficient and automatic deconvolution of 1D NMR spectra.
  • The algorithm successfully handles asymmetric non-Lorentzian line shapes.
  • Precise peak prediction and efficient computation are achieved through core components.
  • Automatic selection of statistical models and evaluation of uncertainty enhance reliability.
  • Excessive peak detection is minimized, leading to cleaner spectral analysis.

Conclusions:

  • NMR-Onion offers a robust and efficient solution for automated 1D NMR spectral deconvolution.
  • The algorithm's ability to handle complex line shapes and minimize false positives improves data interpretation.
  • NMR-Onion represents a valuable open-source tool for researchers in chemistry and related fields.