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Bayesian parameter inference for epithelial mechanics.

Xin Yan1, Goshi Ogita2, Shuji Ishihara3

  • 1Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, The University of Tokyo, Chiba 277-8561, Japan.

Journal of Theoretical Biology
|October 12, 2024
PubMed
Summary
This summary is machine-generated.

We enhanced image-based parameter inference for cell-based mechanical models using Bayesian statistics. This method accurately estimates parameters and reveals key insights into tissue mechanics, like the dispensability of cortical elasticity.

Keywords:
Bayesian inferenceMechanicsModelingMorphogenesis

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Area of Science:

  • Biophysics
  • Computational Biology
  • Developmental Biology

Background:

  • Cell-based mechanical models, like the Cell Vertex Model (CVM), are crucial for understanding epithelial tissue dynamics.
  • Image-based parameter inference was previously developed to formulate CVM functions and estimate parameters from tissue image data.

Purpose of the Study:

  • To improve the utility and flexibility of image-based parameter inference by employing Bayesian statistics.
  • To refine the quantitative dissection of mechanical control in tissue dynamics.

Main Methods:

  • Developed and applied hierarchical and non-hierarchical Bayesian models for image-based parameter inference.
  • Validated the method using synthetic data for accurate parameter estimation.
  • Applied the Bayesian framework to Drosophila wing image data to analyze mechanical anisotropies and force-shape correlations.

Main Results:

  • Bayesian models provided accurate parameter estimates for CVM functions.
  • Parameter estimation reliability is strongly correlated with mechanical anisotropies in epithelial tissues.
  • The cortical elasticity term was found to be dispensable for explaining in vivo force-shape correlations.

Conclusions:

  • The Bayesian statistical framework enhances image-based parameter inference for cell-based mechanical models.
  • This approach facilitates the integration of diverse data types for quantitative analysis of tissue mechanics.
  • Findings contribute to a deeper understanding of the mechanical control governing tissue dynamics.