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Updated: Jun 7, 2025

High-Throughput Total Internal Reflection Fluorescence and Direct Stochastic Optical Reconstruction Microscopy Using a Photonic Chip
Published on: November 16, 2019
Noninvasive megapixel fluorescence microscopy through scattering layers by a virtual incoherent reflection matrix
Gil Weinberg1, Elad Sunray1, Ori Katz1
1Institute of Applied Physics, The Hebrew University of Jerusalem, Jerusalem 9190401, Israel.
This study introduces a novel method for clear fluorescence imaging through scattering media. The technique adapts reflection matrix processing to reconstruct high-resolution images from minimal data, overcoming scattering challenges in complex samples.
Area of Science:
- Biomedical Optics
- Microscopy
- Photonics
Background:
- Optical imaging in complex samples is hindered by light scattering.
- Existing methods for scattering compensation in fluorescence imaging have limitations, including target sparsity or complex requirements.
- Reflection matrix techniques have shown promise for coherent imaging but are not readily applicable to incoherent fluorescence.
Purpose of the Study:
- To adapt reflection matrix techniques for scattering compensation in incoherent fluorescence imaging.
- To develop a method for reconstructing high-resolution fluorescence images from limited measurements in scattering media.
- To overcome the limitations of current scattering compensation approaches in fluorescence microscopy.
Main Methods:
- Developed a virtual fluorescence-based reflection matrix from conventional wide-field microscope images.
- Acquired images under unknown, random illumination patterns.
- Applied an adapted matrix-based scattering compensation algorithm to the constructed matrix.
Main Results:
- Successfully reconstructed megapixel-scale images from fewer than 150 acquired frames.
- Demonstrated effective scattering compensation without spatial light modulators or intensive computation.
- Validated the approach experimentally in complex scattering samples.
Conclusions:
- The presented approach effectively compensates for scattering in incoherent fluorescence imaging.
- This method offers a computationally efficient and practical solution for high-resolution imaging through scattering media.
- The technique has broad implications for various fields requiring deep or through-sample optical imaging.
Related Concept Videos
Super-resolution Fluorescence Microscopy
Confocal Fluorescence Microscopy
Total Internal Reflection Fluorescence Microscopy

