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Updated: Jun 3, 2025

Modeling Brain Metastases Through Intracranial Injection and Magnetic Resonance Imaging
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A hybrid explainable model based on advanced machine learning and deep learning models for classifying brain tumors

Md Nahiduzzaman1, Lway Faisal Abdulrazak2,3, Hafsa Binte Kibria1

  • 1Department of Electrical and Computer Engineering, Rajshahi University of Engineering and Technology, Rajshahi, 6204, Bangladesh.

Scientific Reports
|January 10, 2025
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Summary

This study introduces a novel brain tumor classification method using a lightweight PDSCNN and RRELM model on MRI images. The approach achieves high accuracy for detecting glioma, meningioma, and pituitary tumors.

Keywords:
Brain tumorContrast-limited adaptive histogram equalization (CLAHE)Convolutional neural networks (CNN)Extreme Learning machines (ELM)MRI imagesSHAP (Shapley Additive explanations)

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Area of Science:

  • Medical Imaging
  • Artificial Intelligence
  • Computational Biology

Background:

  • Brain tumors pose a significant global health challenge, necessitating early detection and accurate classification for effective treatment.
  • Current diagnostic methods require improvement in speed and accuracy for diverse brain tumor types.

Purpose of the Study:

  • To develop and evaluate a novel, computationally efficient framework for accurate classification of four brain tumor types (glioma, meningioma, no tumor, pituitary) using MRI images.
  • To enhance feature visibility and extraction for improved diagnostic performance.

Main Methods:

  • Utilized Contrast-Limited Adaptive Histogram Equalization (CLAHE) to improve MRI image quality.
  • Employed a lightweight Parallel Depthwise Separable Convolutional Neural Network (PDSCNN) for feature extraction.
  • Developed a hybrid Ridge Regression Extreme Learning Machine (RRELM) for enhanced classification.
  • Validated performance using five-fold cross-validation and compared against state-of-the-art models.

Main Results:

  • Achieved high average precision (99.35%), recall (99.30%), and accuracy (99.22%) in classifying four brain tumor types.
  • The proposed PDSCNN-RRELM framework demonstrated superior performance compared to the Pseudoinverse Extreme Learning Machine (PELM) and other models.
  • Ridge regression integration significantly improved ELM classification performance, model parameters, and layer sizes.

Conclusions:

  • The novel PDSCNN-RRELM framework offers a highly accurate and efficient solution for brain tumor classification from MRI data.
  • The method enhances diagnostic confidence through improved accuracy and interpretability via SHAP analysis.
  • This approach holds promise for improving clinical decision-making in neuro-oncology.