Heterocyclic Assembly: An Underutilized Disconnection with Potential to Maximize High Fsp3 Chemical Space Exploration
Brandon M Taoka1, Ning Qi2, Zachary G Brill1
1Department of Discovery Chemistry, Merck & Co., Inc., South San Francisco, California 94080, United States.
ACS Medicinal Chemistry Letters
|February 19, 2025
Summary
Chemists can now synthesize diverse heterocyclic compounds using simple carboxylic acids and amines. This new method expands chemical space for drug discovery, achieving high success rates in library synthesis.
Area of Science:
- Organic Chemistry
- Medicinal Chemistry
- Synthetic Chemistry
Background:
- Heterocyclic cores are essential in medicinal chemistry, but their synthesis and functionalization present challenges.
- Current methods often limit access to diverse chemical structures, particularly those with high Fsp3 character.
Purpose of the Study:
- To present a novel strategy for the synthesis of heterocyclic cores using readily available building blocks.
- To demonstrate the library-friendly nature of this approach for medicinal chemistry applications.
- To compare the efficiency of this method with existing state-of-the-art techniques.
Main Methods:
- Utilizing carboxylic acids and amines as ubiquitous building blocks for heterocyclic core formation.
- Developing a library-friendly format for efficient synthesis.
- Adapting and miniaturizing the synthesis for micro-scale parallel medicinal chemistry (PMC).
Main Results:
- The developed strategy enables access to a wider chemical space, including analogs with higher Fsp3 values.
- Successful synthesis of N2-indazoles and C2-benzimidazoles using the new method.
- Achieved an 80% success rate in PMC libraries, comparable to established Suzuki and Buchwald-Hartwig couplings.
Conclusions:
- This novel heterocycle synthesis strategy offers a powerful tool for medicinal chemists.
- The approach facilitates rapid access to diverse heterocyclic libraries, accelerating drug discovery programs.
- The method's efficiency and scalability make it a valuable alternative to current functionalization techniques.
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