Related Experiment Video
Updated: May 23, 2025

Closed-loop Neuro-robotic Experiments to Test Computational Properties of Neuronal Networks
Published on: March 2, 2015
Efficient Training of Neural Network Potentials for Chemical and Enzymatic Reactions by Continual Learning
Yao-Kun Lei1,2,3, Kiyoshi Yagi1,2,4, Yuji Sugita1,2,3,5
1Theoretical Molecular Science Laboratory, RIKEN Cluster for Pioneering Research, Wako, Saitama 351-0198, Japan.
Abstract:
Machine learning (ML) methods have emerged as an efficient surrogate for high-level electronic structure theory, offering precision and computational efficiency. However, the vast conformational and chemical space remains challenging when constructing a general force field. Training data sets typically cover only a limited region of this space, resulting in poor extrapolation performance. Traditional strategies must address this problem by training models from scratch using old and new data sets. In addition, model transferability is crucial for general force field construction. Existing ML force fields, designed for closed systems with no external environmental potential, exhibit limited transferability to complex condensed phase systems such as enzymatic reactions, resulting in inferior performance and high memory costs. Our ML/MM model, based on the Taylor expansion of the electrostatic operator, showed high transferability between reactions in several simple solvents. This work extends the strategy to enzymatic reactions to explore the transferability between more complex heterogeneous environments. In addition, we also apply continual learning strategies based on memory data sets to enable autonomous and on-the-fly training on a continuous stream of new data. By combining these two methods, we can efficiently construct a force field that can be applied to chemical reactions in various environmental media.
More Related Videos
Related Concept Videos
Long-term Potentiation
Introduction to Chemical Reactions
Non-equilibrium in the Cell
Introduction to Enzyme Kinetics
The experimenter can then plot the initial reaction rate or velocity (Vo) of a given trial against the substrate concentration ([S]) to obtain a graph of the reaction properties. For many enzymatic reactions involving a...
Predicting Reaction Outcomes
The Nernst Equation
The interconnection between standard cell potentials and various thermodynamic parameters such as the standard free energy change ΔG° and equilibrium constant K has been previously explored. For example, a redox reaction involving zinc(II) and tin(II) ions at 1 M concentration with Eºcell = +0.291 V and ΔG° = −56.2 kJ is spontaneous.

