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Utilizing pMHC Multimers to Study Antigen-Specific T Cells and T Cell Exhaustion in Chronic Viral Infections
K Keetz1, M Knapp1, J Schulze Zur Wiesch1
1Infectious Diseases Unit, I. Department of Medicine, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
Methods in Molecular Biology (Clifton, N.J.)
|April 12, 2025
Summary
This protocol details peptide-major histocompatibility complex (pMHC) multimer staining and cell separation to isolate rare antigen-specific T cells. This method aids in studying T cell exhaustion and evaluating therapies for chronic viral infections.
Area of Science:
- Immunology
- Cell Biology
- Virology
Background:
- Studying antigen-specific T cells is crucial for understanding immune responses in chronic viral infections.
- Identifying and characterizing low-frequency T cells presents significant technical challenges.
- T cell exhaustion is a key mechanism limiting viral clearance and vaccine efficacy.
Purpose of the Study:
- To present a detailed protocol for isolating and studying low-frequency antigen-specific T cells.
- To enable the evaluation of T cell phenotype and function in the context of chronic viral diseases.
- To provide a foundational method for both basic research and translational applications.
Main Methods:
- Peptide-major histocompatibility complex (pMHC) multimer staining.
- Magnetic activated cell separation (MACS).
- Flow cytometry for phenotyping and functional assays.
Main Results:
- Successful isolation of low-frequency antigen-specific T cells.
- Characterization of T cell phenotype and function.
- Demonstration of the protocol's utility in chronic viral infection models.
Conclusions:
- The pMHC multimer staining and MACS protocol is effective for isolating antigen-specific T cells.
- This methodology facilitates research into T cell exhaustion and therapeutic interventions.
- The protocol is a valuable tool for advancing the study of chronic viral infections.

