Related Experiment Video
Updated: May 5, 2026

An Efficient and Flexible Cell Aggregation Method for 3D Spheroid Production
Published on: March 27, 2017
AMPK Knockout Impairs the Formation of Three-Dimensional Spheroids
Yea-In Park1, Rackhyun Park2, Siyun Lee1
1Division of Biological Science and Technology, Yonsei University, Wonju 26493, Republic of Korea.
AMP-activated protein kinase (AMPK) is crucial for 3D spheroid formation. AMPK knockout cells form abnormal spheroids with impaired autophagy and increased apoptosis, highlighting AMPK's role in cellular energy and tissue structure.
Area of Science:
- Cell Biology
- Biochemistry
- Cancer Research
Background:
- AMP-activated protein kinase (AMPK) regulates cellular energy homeostasis, impacting cell growth, apoptosis, and autophagy.
- Three-dimensional (3D) spheroid culture mimics in vivo tissue structure, offering advantages over 2D cultures for various research fields, including tumor biology.
Purpose of the Study:
- To investigate the role of AMPK in 3D spheroid formation.
- To characterize the morphological and cellular differences in 3D spheroids derived from AMPK knockout cells.
Main Methods:
- Generation of 3D spheroids using AMPK knockout and control cell lines.
- Microscopic analysis of spheroid morphology (shape, length-to-width ratio).
- Assessment of lysosome prominence and autophagic flux.
- Flow cytometry analysis to quantify apoptosis.
Main Results:
- AMPK knockout cells formed oval-shaped spheroids with an increased length-to-width ratio compared to round control spheroids.
- AMPK knockout spheroids exhibited significantly more prominent lysosomes, indicating impaired autophagic flux.
- Flow cytometry revealed a higher percentage of apoptotic cells in AMPK knockout spheroids.
Conclusions:
- AMPK is essential for the proper formation of 3D spheroids.
- Disruption of AMPK signaling affects spheroid morphology, lysosomal function, and cell viability.
- These findings underscore the importance of AMPK in maintaining cellular homeostasis within 3D tissue models.
Related Concept Videos
DNA Damage can Stall the Cell Cycle
Destabilization of Microtubules
DNA Damage Can Stall the Cell Cycle
PI3K/mTOR/AKT Signaling Pathway
cAMP-dependent Protein Kinase Pathways
The Proteasome
In this pathway, the target proteins are first tagged with small proteins called ubiquitin. This involves participation of a series of enzymes including— E1 (ubiquitin-activating enzyme), E2 (ubiquitin-conjugating enzyme), and E3...

