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Updated: Sep 19, 2025

Microcrystal Electron Diffraction of Small Molecules
Published on: March 15, 2021
Microcrystal Electron Diffraction-Guided Discovery of Fungal Metabolites
David A Delgadillo1, Lin Wu2, Caroline Wang3
1Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, United States.
Researchers utilized arrayED, a novel sample preparation method, to accelerate the discovery of new natural products (NPs) using microcrystal electron diffraction (microED). This breakthrough enables direct determination of absolute configurations for novel compounds.
Area of Science:
- Natural product chemistry
- Structural biology
- Crystallography
Background:
- Nature is a rich source of complex molecules driving innovation in medicine and materials.
- Microcrystal electron diffraction (microED) is a powerful technique for small molecule structure determination.
- Current limitations in cost and throughput hinder microED's application in natural product discovery.
Purpose of the Study:
- To demonstrate the efficacy of arrayED for natural product discovery using microED.
- To overcome the throughput and cost limitations of traditional microED methods.
- To discover and structurally characterize novel natural products.
Main Methods:
- Development and application of arrayED for sample preparation.
- Structure determination of small molecules using microED.
- Analysis of natural products from fungal sources.
Main Results:
- Discovery of a novel family of natural products, zopalides A-E.
- Identification of rhytidoside A, a muurolane-type sesquiterpene glycoside.
- Characterization of aspergillicin analogs (H and I) and four known fungal metabolites.
- First-time direct determination of absolute configurations for new natural products using only microED.
Conclusions:
- ArrayED significantly enhances the throughput and applicability of microED for natural product discovery.
- MicroED alone is sufficient for determining the absolute configurations of novel natural products.
- This work opens new avenues for exploring nature's chemical diversity.
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