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Updated: Jun 15, 2026

Testing for Odor Discrimination and Habituation in Mice
Published on: May 5, 2015
Manifold learning for olfactory habituation to strongly fluctuating backgrounds
François X P Bourassa1,2,3, Paul François3,4, Gautam Reddy1
1Joseph Henry Laboratories of Physics, Princeton University, Princeton, NJ 08544, USA.
Abstract:
Animals rely on their sense of smell to survive, but important olfactory cues are mixed with confounding background odors that fluctuate due to atmospheric turbulence. It is unclear how the olfactory system habituates to such stochastic backgrounds to detect behaviorally important odors. Here, we explicitly consider the high-dimensional nature of odor coding, the natural statistics of odor fluctuations and the architecture of the early olfactory pathway. We show that their combination favors a manifold learning mechanism for olfactory habituation over alternatives based on predictive filtering. Manifold learning is implemented in our model by a biologically plausible network of inhibitory interneurons in the early olfactory pathway. We demonstrate that plasticity rules based on IBCM or online PCA are effective at implementing this mechanism in turbulent conditions and outperform previous models relying on mean background subtraction. Interneurons with an IBCM plasticity rule acquire selectivity to independently varying odors. This manifold learning mechanism offers a path towards distinguishing plasticity rules in experiments and could be leveraged by other biological circuits facing fluctuating environments.
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