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Predicting vector distribution in Europe: at what sample size are species distribution models reliable?
Lianne Mitchel1,2, Guy Hendrickx3, Ewan T MacLeod1
1Deanery of Biomedical Sciences, College of Medicine and Veterinary Medicine, University of Edinburgh, Edinburgh, United Kingdom.
Determining the optimal sample size for Random Forest models is crucial for reliable vector-borne disease surveillance. Balanced samples require 750-1,000 data points, while unbalanced samples need more, with 20:80 ratios proving unreliable.
Area of Science:
- Ecological modeling
- Epidemiology
- Machine learning applications
Background:
- Species distribution models (SDMs) predict disease vectors using environmental data.
- Climate change and rising vector-borne diseases necessitate improved surveillance in Europe.
- Current SDM practices lack standardization, particularly regarding optimal sample size.
Purpose of the Study:
- To determine the optimum sample size for Random Forest models.
- To evaluate the impact of different sample ratios on model reliability.
- To inform standardized practices for vector distribution modeling.
Main Methods:
- A simulated vector with a known distribution was used across 10 European test sites.
- 9,000 Random Forest models were trained with varying sample sizes (10-5,000) and ratios (50:50, 20:80, 40:60).
- Model performance was assessed using five metrics, with optimum sample size defined by 25th percentile performance thresholds.
Main Results:
- For balanced samples (50:50), optimum sample sizes ranged from 750-1,000.
- Unbalanced samples (40:60 ratio) required 1,100-1,300 samples for reliable models.
- Unbalanced samples with a 20:80 ratio consistently failed to produce reliable models.
Conclusions:
- This study provides the first estimates of optimum sample size for Random Forest models at high resolution and extent using simulated data.
- Findings can enhance the reliability of SDMs, optimize field sampling, and improve vector surveillance.
- Further research should validate these findings with real vector data and explore model transferability.
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