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Simultaneous Affinity Enrichment of Two Post-Translational Modifications for Quantification and Site Localization
Published on: February 27, 2020
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Two-Cycle Immunoaffinity Enrichment Strategy with Acid Treatment to Enhance Biotherapeutics Assay Sensitivity in
Yipei Zhang1, Mark G Qian1, Xuemei Yang1
1Department of Drug Metabolism and Pharmacokinetics & Modeling, Takeda Development Center Americas, Inc., 35 Landsdowne Street, Cambridge, Massachusetts 02139, United States.
Analytical Chemistry
|July 9, 2025
Summary
A new two-cycle immunoaffinity LC-MS/MS method significantly reduces nonspecific protein binding in tissue bioanalysis. This enhances assay sensitivity for therapeutic antibody quantification in pharmacokinetic and toxicokinetic studies.
Area of Science:
- Bioanalytical Chemistry
- Pharmacokinetics
- Mass Spectrometry
Background:
- Accurate bioanalysis of therapeutic antibodies is vital for pharmacokinetic and toxicokinetic assessments.
- Immunoaffinity LC-MS/MS offers high specificity for antibody quantification in biological matrices.
- Nonspecific protein binding in complex tissue matrices reduces assay sensitivity.
Purpose of the Study:
- To evaluate a novel two-cycle immunoaffinity LC-MS/MS method for quantifying a mouse IgG2a antibody in mouse tissues.
- To reduce nonspecific protein binding and improve assay sensitivity in tissue bioanalysis.
Main Methods:
- A two-cycle immunoaffinity LC-MS/MS method was developed and applied to mouse tumor, liver, and lung tissues.
- The method incorporates an additional automated immunoenrichment cycle to minimize nonspecific binding.
Main Results:
- Nonspecific protein binding was reduced 7.7-24-fold across tumor, liver, and lung tissues.
- A 5-fold sensitivity improvement was observed for mIgG2a in tumor and liver homogenates due to decreased background noise.
- No sensitivity improvement was noted in lung homogenates, likely due to lower inherent interference.
Conclusions:
- The two-cycle immunoaffinity LC-MS/MS method effectively reduces nonspecific binding in tissues.
- This straightforward, high-throughput approach enhances assay sensitivity for therapeutic antibody tissue exposure and distribution studies.
- The method demonstrates precision and accuracy, supporting reliable exposure measurements.

