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Unsupervised skull segmentation in MR images utilizing modality translation and super-resolution
Kamil Kwarciak1, Mateusz Daniol2, Daria Hemmerling2
1Department of Measurement and Electronics, AGH University of Krakow, Kraków, 30-059, Poland. kamil.kwarciak@gmail.com.
Scientific Reports
|July 16, 2025
Summary
This study introduces an unsupervised method for segmenting skull structures from MRI scans by translating them to CT images. This approach avoids radiation risks and achieves superior results compared to existing methods.
Area of Science:
- Computational medicine
- Medical imaging
- Artificial intelligence in healthcare
Background:
- Skull segmentation is crucial in computational medicine but challenging in MRI due to its focus on soft tissues.
- Existing CT-based skull segmentation methods pose radiation risks, necessitating MRI-based alternatives.
- Direct MRI skull segmentation is difficult because MRI resolution is often lower than CT.
Purpose of the Study:
- To develop an unsupervised method for skull segmentation directly from MRI data.
- To overcome the limitations of MRI in bone structure visualization and resolution.
- To provide a radiation-free alternative to CT-based skull segmentation.
Main Methods:
- Leveraging unsupervised modality translation techniques to convert MRI to CT-like images.
- Investigating various deep generative networks, including GANs, diffusion models, and contrastive learning.
- Employing a super-resolution approach to enhance the resolution of MRI-derived images.
- Developing a novel methodology for MRI-based skull segmentation.
Main Results:
- The proposed methodology achieves fast inference for volumetric data.
- Outperforms traditional supervised segmentation methods for skull segmentation.
- Surpasses a novel foundation medical segmentation model.
- Delivers superior results compared to other modality translation techniques.
Conclusions:
- Unsupervised modality translation offers a viable solution for MRI-based skull segmentation.
- The developed method provides a radiation-free and efficient alternative for clinical applications.
- This approach enhances the utility of MRI in tasks traditionally reliant on CT imaging.

