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A Metadata Extraction Approach for Clinical Case Reports to Enable Advanced Understanding of Biomedical Concepts
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Sentence-Aligned Simplification of Biomedical Abstracts.

Brian Ondov1, Dina Demner-Fushman2

  • 1Yale School of Medicine, 333 Cedar St, New Haven, CT 06510, USA.

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|August 26, 2025
PubMed
Summary
This summary is machine-generated.

Foundation language models can simplify complex biomedical abstracts into plain language, improving health literacy. This approach enhances information accessibility while maintaining factual accuracy and trustworthiness for consumers.

Keywords:
Biomedical literatureFoundation Language ModelsText simplification

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Area of Science:

  • Natural Language Processing
  • Biomedical Informatics
  • Health Communication

Background:

  • Biomedical abstracts contain technical jargon, hindering public health literacy and informed decision-making.
  • Existing simplification methods struggle with cohesive abstract-level adaptation and sentence-by-sentence accuracy.

Purpose of the Study:

  • To adapt foundation language models for the Plain Language Adaptation of Biomedical Abstracts task.
  • To develop a sentence-wise autoregressive approach for cohesive abstract simplification.
  • To improve the accessibility and trustworthiness of biomedical information for healthcare consumers.

Main Methods:

  • Utilized a sentence-wise autoregressive approach with foundation language models.
  • Conducted experiments in zero-shot and fine-tuned settings using proprietary and open-source models.
  • Introduced a stochastic regularization technique to prevent source-copying during inference.

Main Results:

  • Achieved a 32-point increase in SARI and a 6-point increase in BERTscore over state-of-the-art.
  • Outperformed recent open-domain and biomedical sentence simplification models on this task.
  • Manual evaluation demonstrated human-level factual accuracy and simplicity.

Conclusions:

  • Adapted foundation language models can effectively simplify biomedical abstracts, enhancing health information accessibility.
  • The proposed methods improve information trustworthiness by retaining clear provenance for simplified statements.
  • This advancement has the potential to significantly improve public health literacy and empower informed health choices.