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Data Acquisition Protocol for Determining Embedded Sensitivity Functions
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An efficient and flexible framework for inferring global sensitivity of agent-based model parameters.

Daniel R Bergman1,2,3, Trachette Jackson1, Harsh Vardhan Jain4

  • 1Department of Mathematics, University of Michigan, Ann Arbor, Michigan, United States of America.

Plos Computational Biology
|September 8, 2025
PubMed
Summary

We developed SMoRe GloS, a fast and accurate method for global sensitivity analysis in agent-based models (ABMs). This approach enhances uncertainty quantification for complex systems, improving the reliability of model predictions.

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Area of Science:

  • Computational Biology
  • Systems Biology
  • Ecological Modeling

Background:

  • Agent-based models (ABMs) simulate complex systems, but their predictions require uncertainty quantification via global sensitivity analysis.
  • Existing global sensitivity methods are computationally expensive, limiting their application to complex ABMs.

Purpose of the Study:

  • Introduce SMoRe GloS (Surrogate Modeling for Recapitulating Global Sensitivity), a computationally efficient method for ABM global sensitivity analysis.
  • Enable accurate uncertainty quantification and parameter space exploration for complex ABMs.

Main Methods:

  • Leverage explicitly formulated surrogate models to approximate ABM behavior.
  • Apply SMoRe GloS to in vitro cell proliferation and 3D vascular tumor growth ABMs.
  • Compare SMoRe GloS performance with Morris and eFAST methods.

Main Results:

  • SMoRe GloS achieved substantial speedups, completing analyses in minutes compared to days for eFAST.
  • The method accurately recovered global sensitivity indices for both simple and complex biological ABMs.
  • SMoRe GloS estimated sensitivities for parameters not explicitly in the surrogate model.

Conclusions:

  • SMoRe GloS offers a computationally efficient and accurate solution for global sensitivity analysis in ABMs.
  • This method enhances uncertainty quantification and model reliability for complex systems.
  • SMoRe GloS facilitates deeper exploration of model behavior and increases confidence in predictions.