Related Experiment Video
Updated: May 6, 2026

Exploring the Root Microbiome: Extracting Bacterial Community Data from the Soil, Rhizosphere, and Root Endosphere
Published on: May 2, 2018
Land use change has profoundly altered the process of bacterial community assembly in the northeastern black soil
Ning Sun1, Xu Zhao1,2, Fangyuan Liu1,3
1Engineering Research Center of Agricultural Microbiology Technology, Ministry of Education & Heilongjiang Provincial Key Laboratory of Ecological Restoration and Resource Utilization for Cold Region & Key Laboratory of Microbiology, College of Heilongjiang Province & School of Life Sciences, Heilongjiang University, Harbin, China.
Introduction:
Soil microorganisms play a critical role in maintaining ecological functions; however, their responses to grassland reclamation and tillage remain poorly understood. This study aims to investigate the effects of these practices on soil bacterial communities in the Northeast China Black Soil Region.
Methods:
We utilized high-throughput sequencing to compare soil bacterial community characteristics between undisturbed grasslands (CK) and reclaimed croplands (F). The analysis focused on assessing structural changes and shifts in ecological strategies of soil bacterial communities under both land-use types.
Results:
Our findings revealed that croplands exhibited higher soil pH and elevated concentrations of nutrients such as ammonium nitrogen, nitrate nitrogen, and total phosphorus compared to pristine grasslands. The Average Variation Degree (AVD) indicated that bacterial communities in cropland soils had greater compositional stability. Additionally, dominant bacterial genera, particularly Sphingomonas and Pseudarthrobacter, were more prevalent in croplands. Using random forest classification modeling, we identified several rare bacterial genera, including Rhodomicrobium, Amycolatopsis, and Clostridium, which, despite each representing less than 1% of the community, played critical roles in shaping microbial community structure. Co-occurrence network analysis showed that reclamation reduced interspecies interactions and significantly decreased network complexity, connectivity, and cohesion (P < 0.05). Neutral community assembly modeling further indicated that stochastic processes were more dominant in the assembly of bacterial communities in croplands compared to undisturbed grasslands.
Discussion:
This study provides a comprehensive understanding of how grassland reclamation and tillage influence soil bacterial communities in the Songnen Plain black soil region. The findings enhance our ecological understanding of land use changes and offer valuable insights for the sustainable management of black soil resources and ecosystems.
More Related Videos
Related Concept Videos
The Soil Ecosystem
Microenvironments
Microbial Mats
Marine Microbial Ecology
Soil Microbial Ecology
Microbes and Climate Change

