Duplex Enzymatic Recombinase Amplification Assay Coupled with Lateral Flow Dipstick for Rapid Identification of

Arpasiri Srisrattakarn1, Aroonwadee Chanawong1, Orapan Sripichai2

  • 1Centre for Research and Development of Medical Diagnostic Laboratories, Faculty of Associated Medical Sciences, Khon Kaen University, Khon Kaen 40002, Thailand.

ACS Infectious Diseases
|October 17, 2025
PubMed

Insights

A new ERA-LFA method accurately detects methicillin-resistant Staphylococcus aureus (MRSA) using nuc and mecA genes. This rapid diagnostic tool shows high sensitivity and specificity in clinical isolates and blood cultures.

Area of Science:

  • Clinical microbiology
  • Molecular diagnostics
  • Infectious disease detection

Background:

  • Methicillin-resistant Staphylococcus aureus (MRSA) poses a significant public health threat.
  • Accurate and rapid detection of MRSA is crucial for effective patient management and infection control.
  • Existing diagnostic methods can be time-consuming or require specialized laboratory equipment.

Purpose of the Study:

  • To develop and evaluate a novel duplex isothermal enzymatic recombinase amplification assay coupled with a lateral flow assay (ERA-LFA) for MRSA detection.
  • To assess the performance of the ERA-LFA method in identifying the presence of specific MRSA marker genes (nuc and mecA) in clinical samples and blood cultures.

Main Methods:

  • A duplex ERA-LFA method was developed to simultaneously detect the nuc and mecA genes.
  • The assay was tested on 46 clinical isolates (differentiated by nuc and mecA carriage) and 57 positive blood culture samples.
  • Performance metrics including sensitivity, specificity, and limit of detection were determined.

Main Results:

  • For clinical isolates, the ERA-LFA achieved 100% sensitivity and 88.9% specificity for nuc detection, and 100% for mecA detection.
  • In blood cultures, the assay demonstrated 100% sensitivity and 95.7% specificity for nuc, and 96.5% specificity for mecA.
  • The detection limits were as low as 1 CFU/reaction for the nuc gene and 10 CFU/reaction for the mecA gene.

Conclusions:

  • The developed ERA-LFA is a highly sensitive and specific method for the rapid detection of MRSA.
  • This assay shows promise for timely diagnosis of MRSA infections directly from clinical specimens, including blood cultures.
  • The ERA-LFA offers a valuable tool for clinical laboratories seeking efficient MRSA screening and identification.