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Updated: Jan 14, 2026

Experimental Protocol for Manipulating Plant-induced Soil Heterogeneity
Published on: March 13, 2014
Carbon source heterogeneity modulates microbial co-occurrence networks and stochastic assembly to drive divergent
Beibei Wang1, Yun Zhang1, Huiting Tan1
1State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China; University of Chinese Academy of Sciences, Beijing, 100049, China.
Abstract:
Remediating polycyclic aromatic hydrocarbon (PAH)-contaminated soils requires understanding how biostimulant types regulate functional microbial communities. This study systematically compared the mechanisms of plant-derived (rice straw [RS] and sodium lignosulfonate [LN]) versus animal manure-derived (pig manure [PM] and cow dung [CD]) biostimulants in reshaping microbial ecological processes during PAH degradation. Through 90-day microcosm experiments, we integrated high-throughput sequencing, qPCR, and co-occurrence network analysis to assess microbial community responses. Results showed plant-derived biostimulants achieved significantly higher PAH degradation efficiency (76.84 % and 73.43 % for high-molecular-weight PAHs [HMW PAHs] in RS and LN, respectively) compared to animal manure-derived ones (24.35 % in CD). The RS treatment specifically enriched nine keystone PAH-degrading genera (e.g., Sphingobium, Micromonospora, Olivibacter). Network analysis revealed RS enhanced positive correlations to 71.09 %, whereas CD reduced network complexity and stability. Null model analysis indicated stochastic processes dominated community assembly under plant-derived biostimulants, while deterministic selection prevailed with animal manure-derived inputs. These findings demonstrate that carbon source characteristics fundamentally shape microbial interaction patterns and assembly processes, providing a theoretical basis for precision biostimulation. Plant-derived biostimulants are preferred for long-term remediation of HMW PAH-contaminated sites, while animal manure-derived options may suit acute pollution scenarios requiring rapid degrader enrichment.
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