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Spatially and Multivalent Matched Neutralizing Aptamer-Based DNA Nanostructure Alleviates Shiga Toxin Type 2
Mengxia Duan1,2, Yuting Chang1,2, Kuaile Wu1,2
1State Key Laboratory of Food Science and Resources, Jiangnan University, Wuxi 214122, China.
Analytical Chemistry
|November 7, 2025
Summary
Researchers developed DNA nanoframes to neutralize Shiga toxin type 2 (Stx2), a dangerous pathogen. This novel approach effectively inhibits Stx2 infection and reduces organ damage, offering a promising strategy against toxin-induced diseases.
Area of Science:
- Biotechnology
- Nanotechnology
- Molecular Biology
Background:
- Shiga toxin type 2 (Stx2) poses a significant global health threat, causing severe conditions like hemolytic uremic syndrome.
- Current strategies to combat Stx2 infection are limited, necessitating innovative therapeutic approaches.
Purpose of the Study:
- To design and evaluate a novel DNA-nanoframework-based strategy for neutralizing Stx2.
- To inhibit Stx2 cellular entry and infection through aptamer-mediated binding.
Main Methods:
- Designed self-assembling DNA tetrahedral nanoframes (TDN) to display three aptamers (TDN-S).
- TDN-S aptamers bind to specific sites on the Stx2 B subunit, blocking Gb3 receptor interaction.
- Evaluated Stx2 inhibition in vitro using cell viability, fluorescence imaging, and ROS assays.
- Assessed in vivo efficacy by measuring damage to liver, kidneys, intestines, and inflammatory responses.
Main Results:
- TDN-S demonstrated excellent neutralization efficiency against Stx2, achieving an 80.44% inhibition rate in vitro.
- The treatment significantly reduced organ damage and inflammatory responses in vivo.
- The multimodal interaction strategy proved effective in mitigating Stx2 toxicity.
Conclusions:
- The DNA nanoframes with aptamer assembly (TDN-S) offer a potent strategy for neutralizing Stx2.
- This approach provides a new avenue for alleviating Stx2 toxicity and serves as a model for inhibiting other toxins.

