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Related Concept Videos

Forced Transdifferentiation01:28

Forced Transdifferentiation

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Transdifferentiation, also known as lineage reprogramming, was first discovered by Selman and Kafatos in 1974 in silkmoths. They observed that the moths’ cuticle-producing cells transformed into salt-producing cells. Many such cases of natural transdifferentiation occur in organisms. In humans, pancreatic alpha cells can become beta cells. In newts, the loss of the eye’s lens causes the pigmented epithelial cells to transdifferentiate into the lens cells.
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Quantifying the Single-Cell Morphological Landscape of Cellular Transdifferentiation through Force Field

Chudan Yu1,2, Chuanbo Liu2, Erkang Wang1,2

  • 1College of Chemistry, Jilin University, Changchun, Jilin, 130012, P. R. China.

Advanced Science (Weinheim, Baden-Wurttemberg, Germany)
|November 7, 2025
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Researchers developed a new machine learning method to reconstruct cell force fields from imaging data, enabling the study of cell fate transitions and dynamics without direct velocity measurements.

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force field reconstructionmorphological changetransdifferentiation

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Area of Science:

  • Single-cell biology
  • Computational biology
  • Biophysics

Background:

  • Transcriptomics advanced cell behavior understanding, but quantitative multi-omic models, especially for cell morphology, are lacking.
  • Cell-specific velocity information is crucial for analyzing cellular dynamics and thermodynamics but is often unavailable.
  • Analyzing cell fate transitions requires understanding the underlying forces driving morphological changes.

Purpose of the Study:

  • To develop a novel machine learning approach for reconstructing cellular force fields from sparse single-cell imaging data.
  • To quantitatively model cell morphology changes during transdifferentiation.
  • To extend the landscape and flux framework to non-steady-state conditions for dynamic cellular processes.

Main Methods:

  • Captured snapshots of fibroblast-to-neuron transdifferentiation.
  • Developed a machine learning method to reconstruct the force field driving morphological changes.
  • Decomposed the force field into flow flux and potential gradient components, adapting to non-steady-state conditions.

Main Results:

  • The reconstructed force field accurately captured the cell morphological landscape during fate switching.
  • The study revealed the influence of noise on cell state transitions.
  • The developed method provides a quantitative framework for analyzing cell morphology dynamics.

Conclusions:

  • The novel machine learning approach successfully reconstructs cellular force fields from sparse imaging data.
  • This method enables the analysis of cell fate transitions and dynamics without direct velocity measurements.
  • The framework is applicable to various single-cell multi-omic datasets lacking inherent velocity information.