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Updated: Jan 10, 2026

Measuring Interactions between Fluorescent Probes and Lignin in Plant Sections by sFLIM Based on Native Autofluorescence
Published on: January 2, 2020
Method for Lignin Analysis in Wood by Fluorescence Microscopy
Josy Tainara Silva Silva1, Silvino Intra Moreira2, Jordão Cabral Moulin1
1Department of Forestry and Wood Sciences, Federal University of Espírito Santo-UFES, Jerônimo Monteiro, Brazil.
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Native Amazonian species present high anatomical variation which is reflected in their lignin content. This study tested different lignin fluorescence treatments and fluorescence intensity processing methods in native Amazonian woods. Validating the fluorescence technique for lignin analysis included relating the total wood lignin content to the fluorescence intensity emitted by lignin in histological sections. Seven native Amazonian species were analyzed. Wood lignin content was obtained by the Klason method. Four treatments were used for fluorescence in the histological sections: autofluorescence (in natura and without extractives), basic fuchsin and Mäule. Images obtained with the fluorescence microscope were processed using ImageJ, applying three different methodologies to obtain fluorescence intensity-two using an integrated density formula and one automatically. Autofluorescence was the most effective treatment for relating fluorescence intensity and lignin content on a slide without extractive, especially when analyzed automatically (Method 3). It showed the second highest coefficient of determination (R2 = 76.22%) and correlation (r = 0.87), and better performance due to its automation in ImageJ, ensuring speed, reproducibility and result standardization. Results indicate the reliability and safety of fluorescence analysis for studying lignin at the cellular level.

