Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Ampere-Maxwell's Law: Problem-Solving01:17

Ampere-Maxwell's Law: Problem-Solving

1.1K
A parallel-plate capacitor with capacitance C, whose plates have area A and separation distance d, is connected to a resistor R and a battery of voltage V. The current starts to flow at t = 0. What is the displacement current between the capacitor plates at time t? From the properties of the capacitor, what is the corresponding real current?
To solve the problem, we can use the equations from the analysis of an RC circuit and Maxwell's version of Ampère's law.
For the first part of the...
1.1K
Mechanistic Models: Compartment Models in Algorithms for Numerical Problem Solving01:29

Mechanistic Models: Compartment Models in Algorithms for Numerical Problem Solving

267
Mechanistic models play a crucial role in algorithms for numerical problem-solving, particularly in nonlinear mixed effects modeling (NMEM). These models aim to minimize specific objective functions by evaluating various parameter estimates, leading to the development of systematic algorithms. In some cases, linearization techniques approximate the model using linear equations.
In individual population analyses, different algorithms are employed, such as Cauchy's method, which uses a...
267
Ampere's Law: Problem-Solving01:31

Ampere's Law: Problem-Solving

4.3K
Ampere's law states that for any closed looped path, the line integral of the magnetic field along the path equals the vacuum permeability times the current enclosed in the loop. If the fingers of the right hand curl along the direction of the integration path, the current in the direction of the thumb is considered positive. The current opposite to the thumb direction is considered negative.
Specific steps need to be considered while calculating the symmetric magnetic field distribution...
4.3K
Predicting Reaction Outcomes02:24

Predicting Reaction Outcomes

9.9K
Kinetics describes the rate and path by which a reaction occurs. In contrast, thermodynamics deals with state functions and describes the properties, behavior, and components of a system. It is not concerned with the path taken by the process and cannot address the rate at which a reaction occurs. Although it does provide information about what can happen during a reaction process, it does not describe the detailed steps of what appears on an atomic or a molecular level. On the other hand,...
9.9K
Hybridization of Atomic Orbitals II03:35

Hybridization of Atomic Orbitals II

47.6K
sp3d and sp3d 2 Hybridization
47.6K
Coupled Reactions01:17

Coupled Reactions

10.5K
Cellular processes such as building and breaking down complex molecules occur through stepwise chemical reactions. Some of these chemical reactions are spontaneous and release energy, whereas others require energy to proceed. Cells often couple the energy-releasing reaction with the energy-requiring one to carry out important cell functions. 
Energy in adenosine triphosphate or ATP molecules is easily accessible to do work. ATP powers the majority of energy-requiring cellular reactions....
10.5K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Regio- and Stereoselective Deprotonation and Functionalization of Strained 1-Aza[n.1.0]bicycles.

Journal of the American Chemical Society·2026
Same author

The Heterocycle Isostere Explorer: A Computational Tool for the Discovery of Novel Aromatic Heterocyclic Isosteres.

Journal of medicinal chemistry·2026
Same author

Differential self-assembly of sequence-isomeric phosphoestamers.

Chemical communications (Cambridge, England)·2026
Same author

Collective asymmetric synthesis of the Strychnos alkaloids via thiophene S,S-dioxide cycloadditions.

Nature chemistry·2026
Same author

C6-Alkoxy substituted penicillins are potent non-covalently binding inhibitors of the SARS-CoV-2 main protease.

RSC medicinal chemistry·2025
Same author

Synthesis, Biological Activity, and Molecular Dynamics Simulations of LNA-Charge Neutral Linkages for Enhanced Splice-Switching Antisense Oligonucleotides.

Angewandte Chemie (International ed. in English)·2025
Same journal

Journal research data policies in materials science.

Digital discovery·2026
Same journal

Text-to-flowsheet: an LLM-assisted pipeline for expert-level digitization and automated simulation of chemical processes.

Digital discovery·2026
Same journal

<i>optimade-maker</i>: automated generation of interoperable materials APIs from static datasets.

Digital discovery·2026
Same journal

RobInHood: a robotic chemist in a fume hood.

Digital discovery·2026
Same journal

Molecular arms race classifier for decrypting venom peptide and ion channel interactions.

Digital discovery·2026
Same journal

Identification of drug candidates against glioblastoma with machine learning and high-throughput screening of heterogeneous cellular models.

Digital discovery·2026
See all related articles

Related Experiment Video

Updated: Jan 10, 2026

Rapid in-silico Battery Electrolyte Electrochemical Reaction Generation using 3T-VASP Multi-Scale Energy Minimization
05:37

Rapid in-silico Battery Electrolyte Electrochemical Reaction Generation using 3T-VASP Multi-Scale Energy Minimization

Published on: August 22, 2025

583

Active learning meets metadynamics: automated workflow for reactive machine learning interatomic potentials.

Valdas Vitartas1, Hanwen Zhang1, Veronika Juraskova1

  • 1Chemistry Research Laboratory 12 Mansfield Road Oxford OX1 3TA UK fernanda.duartegonzalez@chem.ox.ac.uk.

Digital Discovery
|November 26, 2025
PubMed
Summary
This summary is machine-generated.

We developed a data-efficient workflow for training machine-learned interatomic potentials (MLIPs) using automated active learning and metadynamics. This method accurately models organic reactions with minimal data, enhancing computational chemistry capabilities.

More Related Videos

Author Spotlight: In Silico Creation and Impact of Carbonylated Amino Acids on Protein Structure and Function
05:57

Author Spotlight: In Silico Creation and Impact of Carbonylated Amino Acids on Protein Structure and Function

Published on: April 26, 2024

816
Author Spotlight: Advancing Cell Membrane Biophysics - Exploring Interactions and Challenges Through Experimental and Computational Approaches
07:31

Author Spotlight: Advancing Cell Membrane Biophysics - Exploring Interactions and Challenges Through Experimental and Computational Approaches

Published on: September 1, 2023

3.1K

Related Experiment Videos

Last Updated: Jan 10, 2026

Rapid in-silico Battery Electrolyte Electrochemical Reaction Generation using 3T-VASP Multi-Scale Energy Minimization
05:37

Rapid in-silico Battery Electrolyte Electrochemical Reaction Generation using 3T-VASP Multi-Scale Energy Minimization

Published on: August 22, 2025

583
Author Spotlight: In Silico Creation and Impact of Carbonylated Amino Acids on Protein Structure and Function
05:57

Author Spotlight: In Silico Creation and Impact of Carbonylated Amino Acids on Protein Structure and Function

Published on: April 26, 2024

816
Author Spotlight: Advancing Cell Membrane Biophysics - Exploring Interactions and Challenges Through Experimental and Computational Approaches
07:31

Author Spotlight: Advancing Cell Membrane Biophysics - Exploring Interactions and Challenges Through Experimental and Computational Approaches

Published on: September 1, 2023

3.1K

Area of Science:

  • Computational Chemistry
  • Materials Science
  • Chemical Physics

Background:

  • Machine-learned interatomic potentials (MLIPs) offer a cost-effective alternative to ab initio molecular dynamics (AIMD) for atomistic simulations.
  • Current MLIP applications in reaction modeling are limited by the need for extensive training datasets to cover high-energy transition states.

Purpose of the Study:

  • To present a data-efficient, automated workflow for training MLIPs for reaction modeling.
  • To reduce the data requirement for MLIP training, needing only a few initial configurations without prior transition state knowledge.

Main Methods:

  • Combined automated active learning with well-tempered metadynamics for targeted exploration of configuration space.
  • Utilized data-efficient architectures like the linear Atomic Cluster Expansion.
  • Applied the workflow to diverse organic reactions: SN2, methyl shift, and glycosylation.

Main Results:

  • Successfully trained accurate and stable MLIPs for all tested organic reactions.
  • Demonstrated the workflow's effectiveness across different chemical environments and reaction complexities.
  • Validated the strategy's versatility in modeling reactive processes.

Conclusions:

  • The proposed automated workflow significantly enhances the efficiency of MLIP training for reaction modeling.
  • This approach lowers the barrier to entry for using MLIPs in complex chemical simulations.
  • The method shows broad applicability for accurately simulating reactive processes.