Application of machine learning in constructing a diagnostic model for neonatal biliary atresia
Dingding Wang1, Jie Sun1, Yuyan Jin1
1Department of Neonatal Surgery Beijing Children's Hospital Capital Medical University National Center for Children's Health Beijing China.
Pediatric Investigation
|December 22, 2025
Summary
Machine learning models accurately diagnose biliary atresia (BA) in newborns using clinical data. Key indicators like elevated gamma-glutamyl transpeptidase (GGT), platelet (PLT) counts, and acholic stools aid early BA detection for improved outcomes.
Area of Science:
- Pediatric Gastroenterology
- Medical Informatics
- Neonatal Medicine
Background:
- Early diagnosis of biliary atresia (BA) is crucial for timely surgical intervention, such as the Kasai operation, significantly impacting patient prognosis.
- Developing accurate diagnostic tools for BA in neonates remains a clinical challenge.
Purpose of the Study:
- To develop and evaluate machine learning (ML) models for the early diagnosis of BA in neonates.
- To identify key clinical and serological predictors for neonatal BA.
Main Methods:
- Trained five ML models (logistic regression, random forest, support vector machine classifier, multilayer perceptron, extreme gradient boosting) on clinical and laboratory data from neonates with pathological jaundice.
- Utilized a stacking classifier (SC) algorithm to ensemble the best-performing models.
- Included 85 neonates (42 with BA) from January 2013 to December 2023.
Main Results:
- XGBoost and Random Forest models achieved perfect diagnostic performance (AUC = 1.000).
- The ensemble SC model also demonstrated excellent diagnostic accuracy (AUC = 1.000).
- Key predictors identified were elevated gamma-glutamyl transpeptidase (GGT), increased platelet (PLT) counts, and acholic stools.
Conclusions:
- ML models, particularly XGBoost and RF, show high accuracy in diagnosing BA in neonates.
- Elevated GGT, increased PLT counts, and acholic stools are significant predictors for BA.
- This ML-driven approach holds promise for earlier BA identification and intervention in the neonatal period.


