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Updated: Jan 29, 2026

Exploring Sequence Space to Identify Binding Sites for Regulatory RNA-Binding Proteins
Published on: August 9, 2019
The RNA-binding protein SRSF3 controls epicardial formation by regulating splicing and proliferation
Irina-Elena Lupu1, Susann Bruche1, Anob M Chakrabarti2,3
1Institute of Developmental and Regenerative Medicine, British Heart Foundation Centre of Research Excellence, Department of Physiology, Anatomy and Genetics, University of Oxford, Oxford OX3 7TY, UK.
The RNA-binding protein SRSF3 is crucial for epicardial formation during embryonic development. Its deletion halts epicardial cell proliferation, impacting cardiac development and regeneration.
Area of Science:
- Cardiovascular Biology
- Developmental Biology
- Molecular Biology
Background:
- The epicardium plays a vital role in heart development and regeneration.
- Key molecular mechanisms governing epicardial formation remain incompletely understood.
Purpose of the Study:
- To investigate the role of the RNA-binding protein SRSF3 in epicardial formation and function.
- To elucidate the molecular mechanisms underlying SRSF3's regulation of epicardial development.
Main Methods:
- Utilized murine models with targeted Srsf3 deletion in the proepicardium.
- Employed single-cell RNA-sequencing to analyze cellular responses to Srsf3 depletion.
- Performed endogenous irCLIP to map SRSF3-RNA interactions.
Main Results:
- Srsf3 deletion in murine proepicardium caused proliferative arrest and impaired epicardial formation.
- Srsf3 depletion led to reduced epicardial proliferation and epicardium-derived cell (EPDC) formation.
- SRSF3 binds to cell cycle regulators Ccnd1 and Map4k4, influencing both splicing and non-splicing functions.
Conclusions:
- SRSF3 is essential for controlling epicardial proliferation and ensuring proper epicardial formation.
- SRSF3 regulates cardiac development through both splicing-dependent and independent mechanisms.
- Mosaic recombination can significantly confound embryonic phenotyping, underscoring the importance of SRSF3's regulatory role.
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