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Updated: Feb 27, 2026

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Applying Advanced In Vitro Culturing Technology to Study the Human Gut Microbiota
Published on: February 15, 2019
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Exploring infant gut-derived probiotics through 16S rRNA identification and in vitro functional characterization
Ishita Modasiya1, Ritesh Nasit2, Harsh Purohit1
1Postbiotics and Foodomics Lab, Department of Microbiology, School of Science, RK University, Rajkot, Gujarat, India.
Plos One
|February 25, 2026
Summary
Two beneficial bacterial strains, Lb. paracasei IF5YR and Ent. faecium IF5RW2, isolated from infant gut microbiota, show promise as probiotics. They exhibit excellent gastrointestinal resilience and antioxidant properties for gut health applications.
Area of Science:
- Microbiology
- Gut Microbiome Research
- Probiotic Development
Background:
- The infant gut microbiota plays a crucial role in health, influencing digestion, immunity, and metabolism.
- Identifying beneficial microbes from this source is key for developing novel probiotics.
- Probiotics offer potential health benefits, including improved gut health and immune function.
Purpose of the Study:
- To identify and characterize potential probiotic bacterial isolates from infant fecal samples.
- To evaluate the gastrointestinal resilience and functional properties of selected isolates.
- To confirm the safety and taxonomic affiliation of promising probiotic candidates.
Main Methods:
- Screening of 47 bacterial isolates from infant fecal samples.
- 16S rRNA sequencing for bacterial identification and phylogenetic analysis.
- In vitro assays for acid/bile tolerance, autoaggregation, hydrophobicity, bile salt hydrolase activity, and antioxidant capacity (FRAP, ABTS, DPPH).
- Antibiotic susceptibility testing for safety assessment.
Main Results:
- Two isolates, Lb. paracasei IF5YR and Ent. faecium IF5RW2, were identified as promising candidates.
- Both strains demonstrated strong tolerance to acid (pH 1.5) and bile (2%).
- High autoaggregation (>70%) and cell surface hydrophobicity (>90%) were observed.
- Significant bile salt hydrolase activity and potent antioxidant potential (FRAP >75%) were confirmed.
- Antibiotic susceptibility testing indicated a safe profile for both isolates.
Conclusions:
- Lb. paracasei IF5YR and Ent. faecium IF5RW2 show potential as probiotic candidates for gut health and oxidative stress modulation.
- These strains could be developed as functional food ingredients or health supplements.
- Further in vivo and clinical studies are warranted to validate their therapeutic efficacy.

