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Sample Preparation to Bioinformatics Analysis of DNA Methylation: Association Strategy for Obesity and Related Trait Studies
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Tissue-Specific Multi-Omics Integration Demonstrates Molecular Signatures Connecting Obesity to Immune Vulnerability
Ozge Onluturk Aydogan1, Aytac Dursun Oksuzoglu1, Beste Turanli1
1Department of Bioengineering, Faculty of Engineering, Marmara University, Istanbul 34854, Turkey.
Metabolites
|February 26, 2026
Summary
Obesity impacts multiple tissues, influencing gene expression and potentially linking to immune processes and viral infections. This study identifies key genes and molecular interactions, suggesting new avenues for understanding obesity-related disorders.
Area of Science:
- Metabolomics and Systems Biology
- Genomics and Bioinformatics
- Immunology and Infectious Diseases
Background:
- Adipose tissue secretes various molecules, influencing organ function and contributing to obesity-related disorders.
- Obesity's systemic effects necessitate investigating inter-tissue crosstalk to understand its mechanisms.
- Understanding molecular patterns across tissues is crucial for addressing obesity's complex health impacts.
Purpose of the Study:
- To identify candidate molecules and molecular mechanisms underlying obesity.
- To characterize inter-tissue molecular patterns associated with obesity using an integrative network approach.
- To explore potential links between obesity, immune responses, and host-pathogen interactions.
Main Methods:
- Analyzed gene expression profiles from liver, skeletal muscle, blood, and adipose tissues.
- Performed differential gene expression (DEG) analysis, functional enrichment, and protein-protein interaction network analysis.
- Utilized network-based centrality measures and host-pathogen interaction analysis to identify key genes and pathways.
Main Results:
- Muscle, subcutaneous adipose tissue, and blood showed the highest number of DEGs.
- Obesity is associated with cancers, including leukemia, lymphoma, and gastric cancer.
- Influenza A virus interactions were prominent in the host-pathogen network; common metabolites included 2-Oxoglutarate and Adenosine.
Conclusions:
- Obesity may be linked to immune-related biological processes and viral infection pathways.
- Host-pathogen interactions and immune signaling pathways may overlap with obesity-associated molecular signatures.
- Obesity might affect insulin response and glucose metabolism, indicating interactions between immune and metabolic processes, requiring further validation.
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