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Updated: Jun 25, 2026

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DeepOmicsAE: Representing Signaling Modules in Alzheimer's Disease with Deep Learning Analysis of Proteomics, Metabolomics, and Clinical Data
Published on: December 15, 2023
Applying ensemble machine learning techniques to MRI scans to predict Alzheimer's disease.
Georgios Theocharidis1, Sotirios Bisdas2,3, John Pazarzis4
1Independent Researcher, Athens, Greece. theocharidisg@outlook.com.
Scientific Reports
|June 23, 2026
Summary
Machine learning models can predict Alzheimer's disease (AD) conversion in cognitively normal individuals using only MRI scans. This approach offers a cost-effective tool for early risk identification and intervention.
Area of Science:
- Neuroimaging
- Machine Learning
- Alzheimer's Disease Research
Background:
- Alzheimer's disease (AD) is a leading cause of dementia, necessitating early prediction for timely intervention.
- Predicting AD conversion in cognitively normal (CN) individuals before symptom onset is crucial.
- Structural magnetic resonance imaging (MRI) offers potential for early AD detection.
Purpose of the Study:
- To develop and evaluate a machine learning framework for predicting future AD conversion in CN individuals.
- To utilize structural MRI data for identifying preclinical AD signatures.
- To assess the efficacy of an ensemble machine learning approach for early AD risk identification.
Main Methods:
- A machine learning framework employing transfer learning with a pre-trained VGG16 model for feature extraction from structural MRI.
- Processing of five representative 2D MRI slices per scan to generate imaging descriptors.
- Classification using an ensemble of support vector machines (SVM), random forests (RF), and artificial neural networks (ANN) with soft voting.
Main Results:
- The ensemble model achieved a median AUC-ROC of 0.951, accuracy of 0.872, recall of 0.923, and F1 score of 0.811.
- Evaluation on 1,093 subjects from the OASIS-3 dataset using person-wise stratified cross-validation.
- Demonstrated high performance in detecting preclinical AD signatures from structural MRI data.
Conclusions:
- Ensemble machine learning effectively detects preclinical Alzheimer's disease signatures from structural MRI.
- The developed framework provides a practical, accessible, and cost-effective tool for early AD risk identification.
- This approach supports timely interventions by enabling early prediction of AD conversion.
