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Detecting drug-induced EEG alterations with machine learning: A methodological proof-of-concept study in rats treated
Matthieu Basset1, Paul-Emeric Saunier1, Geoffrey Viardot2
1BIOTRIAL DATASCIENCE, 4 chemin de l'Arenas, 06200 Nice, France.
Journal of Pharmacological and Toxicological Methods
|July 21, 2026
Summary
Deep learning models can detect MK-801 induced EEG changes in rats, even with few channels. This method shows promise for preclinical safety and efficacy assessments in neuroscience.
Area of Science:
- Neuroscience
- Computational Neuroscience
- Pharmacology
Background:
- Deep learning for electroencephalogram (EEG) analysis is advancing rapidly.
- Existing architectures may not be optimal for low-channel animal EEG recordings.
- This study explored deep learning's potential for analyzing rat EEG data.
Purpose of the Study:
- To investigate deep learning's ability to detect EEG alterations induced by the NMDAr antagonist MK-801 in rats.
- To assess the suitability of deep learning for brain circuit-related efficacy and safety evaluations.
- To evaluate deep learning performance on low-channel animal EEG data with minimal preprocessing.
Main Methods:
- EEG recordings were obtained from male Sprague-Dawley rats using telemetry implants in a crossover design.
- Signals were segmented into 0.5-s epochs and processed with minimal preprocessing.
- Several deep learning architectures were evaluated for classification tasks, including EEG Conformer.
Main Results:
- EEG Conformer achieved an F-score near 0.90 on the recording-level test set.
- Leave-one-subject-out (LOSO) cross-validation yielded a mean weighted F1-score of 0.646 ± 0.034, indicating generalization to unseen animals.
- MK-801 dose-dependently increased abnormal EEG classifications, and auditory stimulation enhanced detection sensitivity.
Conclusions:
- Deep learning can effectively detect compound-related EEG alterations in low-channel rat recordings with minimal preprocessing.
- The study demonstrated generalization to unseen treatment conditions and entirely unseen animals.
- This approach can complement conventional methods, supporting automated and standardized preclinical EEG workflows for safety and efficacy studies.

