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Multiplex Detection of Bacteria in Complex Clinical and Environmental Samples using Oligonucleotide-coupled Fluorescent Microspheres
Published on: October 23, 2011
Deep learning-driven multiplexed mycotoxin detection via color-size encoded microbead imaging
Xianfeng Lin1, Lixin Kang1, Jiaqi Feng1
1State Key Laboratory of Food Science and Resources, Jiangnan University, Wuxi 214122, China; School of Food Science and Technology, Jiangnan University, Wuxi 214122, China.
Cell Reports Methods
|August 14, 2026
Summary
A new deep learning platform uses 2D-encoded microbeads for rapid, sensitive detection of multiple mycotoxins in food. This advanced method enhances food safety monitoring by analyzing co-contaminants efficiently.
Area of Science:
- Analytical Chemistry
- Biosensing
- Food Science
Background:
- Mycotoxins are significant food safety hazards, with co-contamination posing complex risks.
- Existing detection methods often lack high-throughput capabilities for multiple mycotoxins.
Purpose of the Study:
- To develop a deep learning-driven platform for homogeneous, high-throughput analysis of four mycotoxins.
- To create an innovative 2D-encoding strategy for simultaneous mycotoxin detection.
Main Methods:
- Utilized an aptamer-recognition-triggered DNAzyme walker-hybridization chain reaction (Dz-HCR) cascade for signal amplification on microbeads.
- Implemented a color-size 2D-encoding strategy using two sizes of microbeads and two fluorophores.
- Employed the YOLOv11 deep learning model for rapid image decoding and analysis.
Main Results:
- Achieved high sensitivity (<1 pg/mL) and wide linear ranges for mycotoxin detection.
- Demonstrated excellent specificity and desirable spiked recovery rates (85.6%-114.0%) in food matrices.
- Confirmed practical applicability through consistency with HPLC-MS/MS analysis.
Conclusions:
- The developed platform offers a promising, efficient strategy for high-throughput mycotoxin detection.
- This approach significantly improves data processing efficiency for food safety monitoring.
- The method addresses the challenge of synergistic toxicity from co-contaminated mycotoxins.
Keywords:
CP: biotechnologySingle particle imagingartificial intelligencemultiplex analysisnucleic acid cascade amplificationtwo-dimensional encoding
