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Updated: Sep 9, 2026

Synthesizing Amino Acids Modified with Reactive Carbonyls in Silico to Assess Structural Effects Using Molecular Dynamics Simulations
Published on: April 26, 2024
Synthesis, structure and computational study of N-acetyl-N'-(4-chloro-phen-yl)-thio-urea
Sharatha Kumar1, Tuncer Hökelek2
1Department of Chemistry Yenepoya Institute of Arts Science Commerce and Management Mangaluru Yenepoya University (Deemed to be university) 575013 Karnataka India.
Abstract:
The title compound, C9H9ClN2OS, consists of a chloro-phenyl ring and acetyl moiety bridged over a thio-urea functional group. The dihedral angle between the acetyl group and the planar thio-urea group is 1.9 (5)°, and they are oriented at dihedral angles of 57.9 (5) and 59.77 (16)°, respectively, with respect to the phenyl ring. An intra-molecular N-H⋯O hydrogen bond forms an S(6) ring motif. In the crystal, N-H⋯S and N-H⋯O hydrogen bonds link the mol-ecules, enclosing R 2 2(8) and R 2 2(12) ring motifs, into infinite chains along the a-axis direction. Hirshfeld surface analysis revealed that the most important contributions for crystal packing are H⋯H (31.1%), H⋯Cl/Cl⋯H (16.9%), H⋯S/S⋯H (14.4%), H⋯C/C⋯H (12.9%) and H⋯O/O⋯H (9.4%) inter-actions. Computational methods revealed N-H⋯S and N-H⋯O hydrogen-bonding energies of -13.8 and -10.1 kJ mol-1, respectively. Evaluations of the electrostatic, dispersion and total energy frameworks indicate that the crystal stabilization is dominated by dispersion energy contributions.
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