Related Experiment Video
Updated: Aug 2, 2026

Affinity Purification of Influenza Virus Ribonucleoprotein Complexes from the Chromatin of Infected Cells
Published on: June 3, 2012
Nucleus-targeting domain of the matrix protein (M1) of influenza virus
1Department of Microbiology, University of Virginia School of Medicine, Charlottesville 22908.
Abstract:
The matrix protein M1 of influenza virus A/WSN/33 was shown by immunofluorescent staining to be transported into the nuclei of transfected cells without requiring other viral proteins. We postulated the existence of a potential signal sequence at amino acids 101 to 105 (RKLKR) that is required for nuclear localization of the M1 protein. When CV1 cells were transfected with recombinant vectors expressing the entire M1 protein (amino acids 1 to 252) or just the first 112 N-terminal amino acids, both the complete M1 protein and the truncated M1 protein were transported to the nucleus. In contrast, expression in CV1 cells of vectors coding for M1 proteins with deletions from amino acids 77 to 202 or amino acids 1 to 134 resulted only in cytoplasmic immunofluorescent staining of these truncated M1 proteins without protein being transported to the nucleus. Moreover, no nuclear membrane translocation occurred when CV1 cells were transfected with recombinant vectors expressing M1 proteins with deletions of amino acids 101 to 105 or with substitution at amino acids 101 to 105 of SNLNS for RKLKR. Furthermore, a synthetic oligopeptide corresponding to M1 protein amino acids 90 to 108 was also transported into isolated nuclei derived from CV1 cells, whereas oligopeptides corresponding to amino acid sequences 25 to 40, 67 to 81, and 135 to 164 were not transported into the isolated cell nuclei. These data suggest that the amino acid sequence 101RKLKR105 is the nuclear localization signal of the M1 protein.
Insights
The influenza virus M1 protein
Area of Science:
- Virology
- Molecular Biology
- Cell Biology
Background:
- Influenza virus matrix protein M1 plays a crucial role in viral assembly and uncoating.
- Understanding the intracellular transport mechanisms of viral proteins is essential for comprehending the viral life cycle.
Purpose of the Study:
- To identify the specific region within the influenza virus M1 protein responsible for its nuclear localization.
- To investigate the role of a putative nuclear localization signal (NLS) in M1 protein transport.
Main Methods:
- Immunofluorescent staining to visualize M1 protein localization in transfected cells.
- Site-directed mutagenesis to create M1 protein variants with deletions or substitutions.
- Transfection of CV1 cells with recombinant vectors expressing wild-type and mutant M1 proteins.
- Nuclear import assays using isolated cell nuclei and synthetic M1 protein peptides.
Main Results:
- The M1 protein is transported into the nucleus of transfected cells independently of other viral proteins.
- A specific amino acid sequence, RKLKR at positions 101-105, was identified as essential for M1 nuclear import.
- Truncated M1 proteins retaining the RKLKR sequence were nuclear-localized, while those lacking it remained cytoplasmic.
- Synthetic peptides containing the RKLKR sequence were imported into isolated nuclei, confirming its function as an NLS.
Conclusions:
- The amino acid sequence 101RKLKR105 functions as the nuclear localization signal for the influenza virus M1 protein.
- This finding elucidates a key mechanism governing the intracellular trafficking of a critical influenza virus component.
- The identified NLS provides a target for further research into influenza virus replication and potential antiviral strategies.
Related Concept Videos
Viral Structure
Leaky Scanning
Translocation of Proteins into the Mitochondria
Sorting of outer membrane proteins:
Mitochondrial outer membrane proteins are of two types: the transmembrane, beta-barrel porins, and the membrane-anchored, alpha-helical proteins. Beta-barrel porin precursors are translocated by the TOM complex and inserted into the outer mitochondrial membrane by the SAM complex. In contrast,...
Influenza
Inhibitors Of Virion Release
Inhibitors of Virion Maturation and Assembly

