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Sequence and characterization of an insertion sequence, IS711, from Brucella ovis
S M Halling1, F M Tatum, B J Bricker
1National Animal Disease Center, United States Department of Agriculture, Ames, IA 50010.
Gene
|October 29, 1993
Summary
Researchers identified a novel insertion sequence, IS711, in Brucella ovis. This element exhibits unique characteristics, including inverted repeats and target site duplication, suggesting complex transposition mechanisms.
Area of Science:
- Microbiology
- Genetics
- Molecular Biology
Background:
- Brucella ovis is a pathogen causing reproductive disease in sheep.
- Insertion sequences (IS) are mobile genetic elements that can influence genome evolution.
- Understanding IS elements in Brucella is crucial for studying bacterial pathogenesis and evolution.
Purpose of the Study:
- To characterize the nucleotide sequence and structural features of a novel insertion sequence, IS711, identified in Brucella ovis.
- To investigate the potential mechanisms of IS711 insertion and duplication.
Main Methods:
- Nucleotide sequencing of the IS711 element and flanking regions.
- Bioinformatic analysis of sequence data, including comparison with known IS elements and databases.
- Analysis of inverted repeats, open reading frames (ORFs), and target site duplication.
Main Results:
- The insertion sequence, designated IS711, is 842 bp long with 20-bp imperfect inverted repeats.
- IS711 duplicates a TA dinucleotide at its target site (YTAR).
- Minor nucleotide variations were observed among different IS711 elements.
- Some IS711 elements were found adjacent to identical or similar sequences, suggesting hot spots for insertion and alternative duplication mechanisms.
- No significant homology was found between IS711 and existing DNA or protein databases.
Conclusions:
- IS711 represents a novel insertion sequence in Brucella ovis with distinct structural and insertion characteristics.
- The findings suggest that IS711 may employ complex transposition and duplication strategies.
- IS711 is evolutionarily distinct, showing no resemblance to known mobile genetic elements or their products.