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Updated: Jul 29, 2026

Two- and Three-Dimensional Live Cell Imaging of DNA Damage Response Proteins
Published on: September 28, 2012
The DNA damage response in DNA-dependent protein kinase-deficient SCID mouse cells: replication protein A
L M Fried1, C Koumenis, S R Peterson
1Department of Radiation Oncology, Stanford University School of Medicine, CA 94305, USA.
Abstract:
Severe combined immunodeficient (SCID) mice display an increased sensitivity to ionizing radiation compared with the parental, C.B-17, strain due to a deficiency in DNA double-strand break repair. The catalytic subunit of DNA-dependent protein kinase (DNA-PKCS) has previously been identified as a strong candidate for the SCID gene. DNA-PK phosphorylates many proteins in vitro, including p53 and replication protein A (RPA), two proteins involved in the response of cells of DNA damage. To determine whether p53 and RPA are also substrates of DNA-PK in vivo following DNA damage, we compared the response of SCID and MO59J (human DNA-PKcs-deficient glioblastoma) cells with their respective wild-type parents following ionizing radiation. Our findings indicate that (i) p53 levels are increased in SCID cells following ionizing radiation, and (ii) RPA p34 is hyperphosphorylated in both SCID cells and MO59J cells following ionizing radiation. The hyperphosphorylation of RPA p34 in vivo is concordant with a decrease in the binding of RPA to single-stranded DNA in crude extracts derived from both C.B-17 and SCID cells. These results suggest that DNA-PK is not the only kinase capable of phosphorylating RPA. We conclude that the DNA damage response involving p53 and RPA is not associated with the defect in DNA repair in SCID cells and that the physiological substrate(s) for DNA-PK essential for DNA repair has not yet been identified.
Insights
Severe combined immunodeficient (SCID) mice show radiation sensitivity due to DNA repair defects. DNA-dependent protein kinase (DNA-PK) is implicated, but its exact role in the p53 and RPA DNA damage response remains unclear.
Area of Science:
- Molecular Biology
- Radiation Biology
- Cellular Biology
Background:
- Severe combined immunodeficient (SCID) mice exhibit heightened sensitivity to ionizing radiation, linked to impaired DNA double-strand break repair.
- The catalytic subunit of DNA-dependent protein kinase (DNA-PKcs) is a prime suspect for the SCID gene mutation.
- DNA-PK phosphorylates key proteins like p53 and replication protein A (RPA) in vitro, which are crucial for DNA damage response.
Purpose of the Study:
- To investigate if p53 and RPA are in vivo substrates of DNA-PK following DNA damage.
- To compare the DNA damage response in SCID mice and human DNA-PKcs-deficient MO59J cells versus their wild-type counterparts.
Main Methods:
- Ionizing radiation exposure of SCID and MO59J cells and their wild-type controls.
- Analysis of p53 levels and RPA p34 phosphorylation status post-irradiation.
- Assessment of RPA binding to single-stranded DNA in cellular extracts.
Main Results:
- p53 levels increased in SCID cells after ionizing radiation.
- RPA p34 showed hyperphosphorylation in both SCID and MO59J cells post-irradiation.
- Hyperphosphorylation of RPA p34 correlated with reduced RPA binding to single-stranded DNA.
Conclusions:
- The DNA damage response involving p53 and RPA is not directly linked to the DNA repair defect in SCID cells.
- DNA-PK is not the sole kinase responsible for RPA phosphorylation in vivo.
- The critical physiological substrate(s) of DNA-PK essential for DNA repair remain unidentified.
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