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Related Experiment Videos

GXD: a gene expression database for the laboratory mouse. The Gene Expression Database Group

M Ringwald1, M E Mangan, J T Eppig

  • 1The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA. ringwald@informatics.jax.org

Nucleic Acids Research
|December 10, 1998
PubMed
Summary

The Gene Expression Database (GXD) provides freely accessible mouse gene expression data for developmental studies. It integrates with other databases for comprehensive genotype, expression, and phenotype analysis.

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Area of Science:

  • Bioinformatics
  • Developmental Biology
  • Genomics

Background:

  • The Gene Expression Database (GXD) is a crucial community resource for mouse gene expression data.
  • Accurate and integrated expression data is vital for understanding developmental biology and genomics.

Purpose of the Study:

  • To describe the Gene Expression Database (GXD) as a comprehensive resource for mouse gene expression information.
  • To highlight GXD's integration capabilities for advanced data analysis.

Main Methods:

  • Implementation as a relational database.
  • Integration with the Mouse Genome Database (MGD).
  • Interconnection with sequence and cross-species databases.

Main Results:

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  • GXD stores and integrates extensive mouse gene expression data, with a focus on development.
  • Data is freely available in formats suitable for comprehensive analysis.
  • Integration enables global analysis of genotype, expression, and phenotype.

Conclusions:

  • GXD serves as a valuable, integrated resource for researchers studying mouse gene expression.
  • Its interconnections enhance the utility of gene expression data analysis.
  • The database is accessible via the Mouse Genome Informatics Web Site.