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Bioinformatics (Oxford, England)|March 4, 2009
DIYA: a bacterial annotation pipeline for any genomics labAndrew C Stewart, Brian Osborne, Timothy D ReadMolecular & Cellular Proteomics : MCP|February 12, 2009
Identification of Bacillus anthracis spore component antigens conserved across diverse Bacillus cereus sensu lato strainsSanghamitra Mukhopadhyay, Arya Akmal, Andrew C Stewart, et al.Plos One|July 4, 2008
Genotyping of Bacillus cereus strains by microarray-based resequencingMichael E Zwick, Maureen P Kiley, Andrew C Stewart, et al.Genome Announcements|July 2, 2013
Genome Sequencing of Four Strains of Rickettsia prowazekii, the Causative Agent of Epidemic Typhus, Including One Flying Squirrel IsolateKimberly A Bishop-Lilly, Hong Ge, Amy Butani, et al.Plos One|June 16, 2015
'SEEDY' (Simulation of Evolutionary and Epidemiological Dynamics): An R Package to Follow Accumulation of Within-Host Mutation in PathogensColin J Worby, Timothy D ReadPeerj|July 18, 2018
Staphylococcus aureus viewed from the perspective of 40,000+ genomesRobert A Petit, Timothy D ReadNature Genetics|March 30, 2012
Genome-wide recombination in Chlamydia trachomatisSandeep J Joseph, Timothy D ReadTrends in Biotechnology|October 22, 2010
Bacterial population genomics and infectious disease diagnosticsSandeep J Joseph, Timothy D ReadGenome Medicine|January 17, 2015
Characterizing the genetic basis of bacterial phenotypes using genome-wide association studies: a new direction for bacteriologyTimothy D Read, Ruth C MasseyPageof 19