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Expert Review of Proteomics|April 14, 2025
Recent implementations of data-independent acquisition for cancer biomarker discovery in biological fluidsAnnie Ha, Michael Woolman, Matthew Waas, et al.STAR Protocols|October 18, 2024
Protocol for generating high-fidelity proteomic profiles using DROPPSMatthew Waas, Meinusha Govindarajan, Amanda Khoo, et al.Nature Biotechnology|June 16, 2025
Identification of non-canonical peptides with moPepGenChenghao Zhu, Lydia Y Liu, Annie Ha, et al.EMBO Molecular Medicine|December 25, 2016
Reprogramming-derived gene cocktail increases cardiomyocyte proliferation for heart regenerationYuan-Yuan Cheng, Yu-Ting Yan, David J Lundy, et al.Biorxiv : the Preprint Server for Biology|April 8, 2024
moPepGen: Rapid and Comprehensive Identification of Non-canonical PeptidesChenghao Zhu, Lydia Y Liu, Annie Ha, et al.Journal of Proteome Research|April 5, 2024
Comprehensive Prostate Fluid-Based Spectral Libraries for Enhanced Protein Detection in UrineAnnie Ha, Amanda Khoo, Vladimir Ignatchenko, et al.Biorxiv : the Preprint Server for Biology|September 2, 2025
Ancestry-Dependent Immunologic and Prognostic Effects Characterize the Prostate Cancer Urinary ProteomeAnnie Ha, Jaron Arbet, Zhuyu Qiu, et al.Nature Methods|December 1, 2020
diaPASEF: parallel accumulation-serial fragmentation combined with data-independent acquisitionFlorian Meier, Andreas-David Brunner, Max Frank, et al.Nature Communications|December 31, 2024
Molecular correlates for HPV-negative head and neck cancer engraftment prognosticate patient outcomesMatthew Waas, Christina Karamboulas, Benson Z Wu, et al.Pageof 1