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Frontiers in Microbiology|January 11, 2020
Detailed Evaluation of Data Analysis Tools for Subtyping of Bacterial Isolates Based on Whole Genome Sequencing: Neisseria meningitidis as a Proof of ConceptAssia Saltykova, Wesley Mattheus, Sophie Bertrand, et al.
Applied Microbiology and Biotechnology|May 8, 2019
Development of a real-time PCR method for the genoserotyping of Salmonella Paratyphi B variant JavaMathieu Gand, Wesley Mattheus, Assia Saltykova, et al.
Plos One|February 7, 2018
Comparison of SNP-based subtyping workflows for bacterial isolates using WGS data, applied to Salmonella enterica serotype Typhimurium and serotype 1,4,[5],12:i:Assia Saltykova, Véronique Wuyts, Wesley Mattheus, et al.
Scientific Reports|May 11, 2019
MinION sequencing technology to characterize unauthorized GM petunia plants circulating on the European Union marketMarie-Alice Fraiture, Gabriella Ujhelyi, Jaroslava Ovesná, et al.
Scientific Reports|May 23, 2018
Nanopore sequencing technology: a new route for the fast detection of unauthorized GMOMarie-Alice Fraiture, Assia Saltykova, Stefan Hoffman, et al.
International Journal of Molecular Sciences|August 14, 2020
Strain-Level Metagenomic Data Analysis of Enriched In Vitro and In Silico Spiked Food Samples: Paving the Way towards a Culture-Free Foodborne Outbreak Investigation Using STEC as a Case StudyAssia Saltykova, Florence E Buytaers, Sarah Denayer, et al.
Food Chemistry. Molecular Sciences|April 13, 2022
Detection and identification of authorized and unauthorized GMOs using high-throughput sequencing with the support of a sequence-based GMO databaseAssia Saltykova, Julien Van Braekel, Nina Papazova, et al.
Microorganisms|August 9, 2020
A Practical Method to Implement Strain-Level Metagenomics-Based Foodborne Outbreak Investigation and Source Tracking in RoutineFlorence E Buytaers, Assia Saltykova, Sarah Denayer, et al.
Frontiers in Microbiology|November 22, 2021
Towards Real-Time and Affordable Strain-Level Metagenomics-Based Foodborne Outbreak Investigations Using Oxford Nanopore Sequencing TechnologiesFlorence E Buytaers, Assia Saltykova, Sarah Denayer, et al.
Scientific Reports|March 11, 2020
Combining short and long read sequencing to characterize antimicrobial resistance genes on plasmids applied to an unauthorized genetically modified BacillusBas Berbers, Assia Saltykova, Cristina Garcia-Graells, et al.
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