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Genome Research|August 14, 2025
Unveiling the functional fate of duplicated genes through expression profiling and structural analysisAlex Warwick Vesztrocy, Natasha Glover, Paul D Thomas, et al.BMC Evolutionary Biology|June 25, 2008
Covariance of maximum likelihood evolutionary distances between sequences aligned pairwiseChristophe Dessimoz, Manuel GilBriefings in Bioinformatics|January 20, 2011
Base-calling for next-generation sequencing platformsChristian Ledergerber, Christophe DessimozGenome Biology|April 8, 2010
Phylogenetic assessment of alignments reveals neglected tree signal in gapsChristophe Dessimoz, Manuel GilMethods in Molecular Biology (Clifton, N.J.)|November 5, 2016
Gene Ontology: Pitfalls, Biases, and RemediesPascale Gaudet, Christophe DessimozPlos One|February 14, 2015
Phylogenetic profiling: how much input data is enough?Nives Škunca, Christophe DessimozPlos Computational Biology|January 17, 2009
Phylogenetic and functional assessment of orthologs inference projects and methodsAdrian M Altenhoff, Christophe DessimozMethods in Molecular Biology (Clifton, N.J.)|November 5, 2016
A Gene Ontology Tutorial in PythonAlex Warwick Vesztrocy, Christophe DessimozGenome Biology and Evolution|September 10, 2013
Bidirectional best hits miss many orthologs in duplication-rich clades such as plants and animalsDaniel A Dalquen, Christophe DessimozBioinformatics (Oxford, England)|July 14, 2020
Benchmarking gene ontology function predictions using negative annotationsAlex Warwick Vesztrocy, Christophe DessimozPageof 19