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Current Opinion in Genetics & Development|November 10, 2017
The rewiring of transcription circuits in evolutionAlexander D JohnsonPlos Computational Biology|June 10, 2020
A framework for integrating directed and undirected annotations to build explanatory models of cis-eQTL dataDavid Lamparter, Rajat Bhatnagar, Katja Hebestreit, et al.Molecular Biology of the Cell|July 9, 2011
The reconstructed ancestral subunit a functions as both V-ATPase isoforms Vph1p and Stv1p in Saccharomyces cerevisiaeGregory C Finnigan, Victor Hanson-Smith, Benjamin D Houser, et al.Proceedings of the National Academy of Sciences of the United States of America|August 25, 2025
Shared metabolism between a bacterial and fungal species that reside in the human gutHaley Gause, Alexander D JohnsonCold Spring Harbor Symposia on Quantitative Biology|December 15, 2015
How Transcription Networks Evolve and Produce Biological NoveltyIsabel Nocedal, Alexander D JohnsonCurrent Biology : CB|September 14, 2010
Evolution of transcription networks--lessons from yeastsHao Li, Alexander D JohnsonMolecular Biology of the Cell|April 9, 2005
Induction of the Candida albicans filamentous growth program by relief of transcriptional repression: a genome-wide analysisDavid Kadosh, Alexander D JohnsonBMC Biology|April 23, 2010
MochiView: versatile software for genome browsing and DNA motif analysisOliver R Homann, Alexander D JohnsonAnnual Review of Genetics|July 7, 2007
Genetics of Candida albicans, a diploid human fungal pathogenSuzanne M Noble, Alexander D JohnsonMolecular Microbiology|August 26, 2010
Temporal anatomy of an epigenetic switch in cell programming: the white-opaque transition of C. albicansMatthew B Lohse, Alexander D JohnsonPageof 13