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Briefings in Functional Genomics|November 11, 2017
Catching RNAs on chromatin using hybridization capture methodsMartin Machyna, Matthew D SimonCold Spring Harbor Perspectives in Biology|November 3, 2019
Principles and Practices of Hybridization Capture Experiments to Study Long Noncoding RNAs That Act on ChromatinMatthew D Simon, Martin MachynaJournal of the American Chemical Society|July 1, 2004
Adaptability at a protein-DNA interface: re-engineering the engrailed homeodomain to recognize an unnatural nucleotideMatthew D Simon, Kevan M ShokatMethods in Enzymology|August 23, 2012
A method to site-specifically incorporate methyl-lysine analogues into recombinant proteinsMatthew D Simon, Kevan M ShokatRNA (New York, N.Y.)|April 7, 2023
bakR: uncovering differential RNA synthesis and degradation kinetics transcriptome-wide with Bayesian hierarchical modelingIsaac W Vock, Matthew D SimonNature Structural & Molecular Biology|March 12, 2020
Enhanced nucleotide chemistry and toehold nanotechnology reveals lncRNA spreading on chromatinMartin Machyna, Lea Kiefer, Matthew D SimonNature Structural & Molecular Biology|March 24, 2020
Author Correction: Enhanced nucleotide chemistry and toehold nanotechnology reveals lncRNA spreading on chromatinMartin Machyna, Lea Kiefer, Matthew D SimonMethods in Molecular Biology (Clifton, N.J.)|September 24, 2016
Capture Hybridization Analysis of DNA TargetsAlec N Sexton, Martin Machyna, Matthew D SimonJournal of the American Chemical Society|October 25, 2018
Expanding the Nucleoside Recoding Toolkit: Revealing RNA Population Dynamics with 6-ThioguanosineLea Kiefer, Jeremy A Schofield, Matthew D SimonNature|August 10, 2017
m6A mRNA methylation controls T cell homeostasis by targeting the IL-7/STAT5/SOCS pathwaysHua-Bing Li, Jiyu Tong, Shu Zhu, et al.Pageof 9