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Proteins
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July 26, 2021
Benchmarking of structure refinement methods for protein complex models
Jacob Verburgt, Daisuke Kihara
Methods in Molecular Biology (Clifton, N.J.)
|
September 7, 2023
Recent Deep Learning Applications to Structure-Based Drug Design
Jacob Verburgt, Anika Jain, Daisuke Kihara
Methods (San Diego, Calif.)
|
May 24, 2022
Multi-level analysis of intrinsically disordered protein docking methods
Jacob Verburgt, Zicong Zhang, Daisuke Kihara
Protein Science : a Publication of the Protein Society
|
August 18, 2025
AlphaFold model quality self-assessment improvement via deep graph learning
Jacob Verburgt, Zicong Zhang, Daisuke Kihara
Biorxiv : the Preprint Server for Biology
|
December 18, 2023
Improved Peptide Docking with Privileged Knowledge Distillation using Deep Learning
Zicong Zhang, Jacob Verburgt, Yuki Kagaya, et al.
ACS Omega
|
July 7, 2025
Learning with Privileged Knowledge Distillation for Improved Peptide-Protein Docking
Zicong Zhang, Jacob Verburgt, Yuki Kagaya, et al.
Evolutionary Bioinformatics Online
|
December 13, 2021
Evolutionary Dynamics of Indels in SARS-CoV-2 Spike Glycoprotein
R Shyama Prasad Rao, Nagib Ahsan, Chunhui Xu, et al.
Proteins
|
November 8, 2019
Performance and enhancement of the LZerD protein assembly pipeline in CAPRI 38-46
Charles Christoffer, Genki Terashi, Woong-Hee Shin, et al.
Proteins
|
August 2, 2025
Structure Modeling Protocols for Protein Multimer and RNA in CASP16 With Enhanced MSAs, Model Ranking, and Deep Learning
Yuki Kagaya, Tsukasa Nakamura, Jacob Verburgt, et al.
Proteins
|
March 17, 2025
Integrative Protein Assembly With LZerD and Deep Learning in CAPRI 47-55
Charles Christoffer, Yuki Kagaya, Jacob Verburgt, et al.
Page
of 2
Search research articles
Search
Showing results (1-10 of 17) with videos related to
Sort By:
Page
of 2
Proteins
|
July 26, 2021
Benchmarking of structure refinement methods for protein complex models
Jacob Verburgt, Daisuke Kihara
Methods in Molecular Biology (Clifton, N.J.)
|
September 7, 2023
Recent Deep Learning Applications to Structure-Based Drug Design
Jacob Verburgt, Anika Jain, Daisuke Kihara
Methods (San Diego, Calif.)
|
May 24, 2022
Multi-level analysis of intrinsically disordered protein docking methods
Jacob Verburgt, Zicong Zhang, Daisuke Kihara
Protein Science : a Publication of the Protein Society
|
August 18, 2025
AlphaFold model quality self-assessment improvement via deep graph learning
Jacob Verburgt, Zicong Zhang, Daisuke Kihara
Biorxiv : the Preprint Server for Biology
|
December 18, 2023
Improved Peptide Docking with Privileged Knowledge Distillation using Deep Learning
Zicong Zhang, Jacob Verburgt, Yuki Kagaya, et al.
ACS Omega
|
July 7, 2025
Learning with Privileged Knowledge Distillation for Improved Peptide-Protein Docking
Zicong Zhang, Jacob Verburgt, Yuki Kagaya, et al.
Evolutionary Bioinformatics Online
|
December 13, 2021
Evolutionary Dynamics of Indels in SARS-CoV-2 Spike Glycoprotein
R Shyama Prasad Rao, Nagib Ahsan, Chunhui Xu, et al.
Proteins
|
November 8, 2019
Performance and enhancement of the LZerD protein assembly pipeline in CAPRI 38-46
Charles Christoffer, Genki Terashi, Woong-Hee Shin, et al.
Proteins
|
August 2, 2025
Structure Modeling Protocols for Protein Multimer and RNA in CASP16 With Enhanced MSAs, Model Ranking, and Deep Learning
Yuki Kagaya, Tsukasa Nakamura, Jacob Verburgt, et al.
Proteins
|
March 17, 2025
Integrative Protein Assembly With LZerD and Deep Learning in CAPRI 47-55
Charles Christoffer, Yuki Kagaya, Jacob Verburgt, et al.
Page
of 2