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Microbial Ecology|June 3, 2018
Determinants of Soil Bacterial and Fungal Community Composition Toward Carbon-Use Efficiency Across Primary and Secondary Forests in a Costa Rican Conservation AreaKatie M McGee, William D Eaton, Shadi Shokralla, et al.Plos One|November 18, 2020
Freshwater diatom biomonitoring through benthic kick-net metabarcodingVictoria Carley Maitland, Chloe Victoria Robinson, Teresita M Porter, et al.Frontiers in Plant Science|January 30, 2024
Influence of plant species, mycorrhizal inoculant, and soil phosphorus level on arbuscular mycorrhizal communities in onion and carrot rootsUmbrin Ilyas, Lindsey J du Toit, Mehrdad Hajibabaei, et al.Scientific Reports|November 17, 2017
DNA metabarcoding for high-throughput monitoring of estuarine macrobenthic communitiesJorge Lobo, Shadi Shokralla, Maria Helena Costa, et al.Scientific Reports|October 31, 2015
A DNA Mini-Barcoding System for Authentication of Processed Fish ProductsShadi Shokralla, Rosalee S Hellberg, Sara M Handy, et al.BMC Bioinformatics|April 1, 2022
LANDMark: an ensemble approach to the supervised selection of biomarkers in high-throughput sequencing dataJosip Rudar, Teresita M Porter, Michael Wright, et al.Journal of Fish Biology|March 5, 2025
Morphological and metabarcoding dietary analysis of the cunner wrasse (Tautogolabrus adspersus) revealed significant regional variation, with large overlap between its common prey species and biofouling animals living on salmonid sea cagesChristopher J D Bender, Camden D Moir, Mehrdad Hajibabaei, et al.Methods in Molecular Biology (Clifton, N.J.)|July 23, 2008
Assembling DNA barcodes. Analytical protocolsJeremy R deWaard, Natalia V Ivanova, Mehrdad Hajibabaei, et al.Plos One|January 6, 2016
Ribosomal DNA and Plastid Markers Used to Sample Fungal and Plant Communities from Wetland Soils Reveals Complementary BiotasTeresita M Porter, Shadi Shokralla, Donald Baird, et al.Gene|November 8, 2003
Thermophilic prokaryotes have characteristic patterns of codon usage, amino acid composition and nucleotide contentGregory A C Singer, Donal A HickeyPageof 10